Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0281 ATGGGAAAGAAAGCTTTGAAGCTTCCCTCTCTTTTCAAAACCAAGGAAGCACCAAGAAAGCACCATCATCCATGGCAATTCGTGCCCTCTTGTGGCCACTCAAAGACCCTCTCTTTCCGAGGTGGAGATGATGACATCTTCAAGACAGTAAACTCTGTGTTCTTCGACCCTTCAGAGAGCGTTATTGAAACTCCCAAGTCATGGTTCACTACCACCTCATCTGAATCTGCCAGCATCTCAACTGAGTCAGAAGACTACTACTACTGTGATGGGGAGTCTTTGGAGATGTTGGTACGTGGGGTGCGGTCAGAGAGGCTGTTTTTCGAACCAGGTGACACAAGCTCCATTTTGGAAAAGGCTAAGGCTAGTGGTTTTCCTTTCAAAGAAAGTGTGGTCCTAGCTATGGAGTCAGAGGACCCTTATGAGGACTTCAAGAGATCAATGGAGGAGATGGTTGAGTCTCATGGAGTAAGGGATTGGGAGGGTTTGGAGGAGCTTTTGACTTGGTATTTGAGGGTCAATGGTAAGAATAATCATGGGTTTATAGTGGGTGCTTTTGTGGATTTACTCTTTAGTTTAGCAGCTTCTGGTTCTAACTCTTGTTCTGATTCAACTGCATATTCTTCTgctgtttcttctttttcttcttcccccTTGTGTCCAACTGAGGGACAAAATGAGATTGTTGAGCATGGGATTGGGAATGATGATGCTTTATCGTCTTAG 726 0.4311 MGKKALKLPSLFKTKEAPRKHHHPWQFVPSCGHSKTLSFRGGDDDIFKTVNSVFFDPSESVIETPKSWFTTTSSESASISTESEDYYYCDGESLEMLVRGVRSERLFFEPGDTSSILEKAKASGFPFKESVVLAMESEDPYEDFKRSMEEMVESHGVRDWEGLEELLTWYLRVNGKNNHGFIVGAFVDLLFSLAASGSNSCSDSTAYSSAVSSFSSSPLCPTEGQNEIVEHGIGNDDALSS 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0281 241 PANTHER TRANSCRIPTION REPRESSOR OFP13 6 219 - -
Ssu7g0281 241 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 6 219 IPR038933 GO:0045892
Ssu7g0281 241 Pfam Transcriptional repressor, ovate 137 193 IPR006458 -
Ssu7g0281 241 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 131 194 IPR006458 -
Ssu7g0281 241 ProSiteProfiles OVATE domain profile. 133 192 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0281 Ssu-Chr7 4628352 4629077 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Ssu7g0281 Ovate 2.2e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0281 - - gmx:100527123 408.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2621 7 51761863 51765981 Ssu7g0281 7 4628352 4629077 ECH
Ssu4g0811 4 12633161 12633937 Ssu7g0281 7 4628352 4629077 ECH
Ssu7g0281 7 4628352 4629077 Ssu7g0281 7 4628352 4629077 ECH