Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0250 ATGGAGCTTTCTGCATTGCCGAGCTTCAAAGCAGTTTCTAATGCTTCGTTATTCCCATTTTCTTCGAATCAAGTTTGCTGCCGATGCTCTCTTCGTCTTCGTCGGCGCGATTATGGCTTATGTTCGAGTCCCAAGTCAAAGCCGTTTGTTCGGATCAGGATGTGCTCGGAGAAAGGTTCGTCGTCGAACGGTCACGGTGGAATCGAGAGCGGAGAAACGAAATCTGATTTCGTCGAAGTCATTGGCATTGGCTCTAGGAAGGACGCTGTTTTTGATTTCTGCTTTAACTCGCCGTTTCAGTTACCGTCGCTGCGTTTTTGGAATATCCTTATGAAAGAATCACAAGAGGTGCAATTACAACAAAGGTCAATAGAAGAagAACCTCATCCAAGAATTGTCAAAGCTCCAGTATTTTTGAAGTCGTGCTCAAAGACTATTGTCCTTGTGGCCAGTGCAGGATATGGCTTGTATGACACTGTTGTAGCTGATATTTTTGAAACTGTAAGGTCCAGGAATGGATTAACAGTTGCTATAGTTTTGAAGCCATTTAGATTTGAAGGGCTTAGAAGACAAGATGAGGTGAAAGCCTTGATGCAGAAACTTAGGGAGAACACAAATTTACTTATTGAAATTGATATTGATGCACTGCTCGAGAAAGACTTGTTGACTCTAGATGAGGCCATGAAGACTGCTAATGATGCAGTTTCGCTAGCTATTAAGGCTGTCTCTGTTATAAAatctGAGATGCACAGAAAATTTATAGATAGATTGAATGATAGCATGAAAGAGGCCAGCACGTcagaaattaataaaATGTTGGAATCCTATAAAGAAGCAGGGATTGGATTTGGAGCTGCATATAACATCAAAGCTTCAATTTTGCAGTCTATATTTGATAGTCCTTTCCTGGGTGTTCGTTTGAAGGATCCAAATAGCATAGTTATATGCATTCTTGCGTGTTCAGTACCCATCAATGATAGTAATATAGCAATCTTTCTGCGTACGTTCCGTCAAACAACAGAATACACAAGGGATATTATAATATCAACAATATGTGACCCTACTGTTGAGCCCAACCTACTCATAACAACAGTCCTTACACTTggCTGTTTAAATGTGCAACGGTCTTCCCAGAATGGTGGTATACTGTCCAGACTTGCTCTGCgttttcctcttatttttagcttttgggGAAGACATAATCAGGGACAAGTTGGCTCTAGGAAACAGACTGAAGTATTTCCTCATGAAGTGATGAGTACTGACGACATTGATGAGAGGACAAATAGGATTGCTTCTGATGACATAGATAGCAATCTTGATAAATACTATGAAGAGTTGGAGCCAGCAATGACCAACAACAGCTCAAAGTTGCCTGTTTCAAGGGATTCtgtgaaaaatgaagaagattTATTTGACACCACGTCCAACTATAACATCCTTTATGACTCTATTACCAAAGGAGTTGCATTAGGTGACTCTGCTTTTCAAAGGGAGCAACTTGAGAACTGGAATCTAGGTCCTGGATTTGAGATGGCAAAGGAGTGGGCCCAAGAAAAAGCAGCTGATGCTACACCCATTGTTGATAACCTGAGCATCTTCTACCTTCCTGTTGGTGTGAGGCCTTCAGAAGAGTTGAAAGACAGTTTGGAAATCTCATTTATGACAAAACAGCATGAGCCGGATACTGATAATGATATGAAAGCACAAACATTAAACGGAGGTTTGTCTCCTTGGAGTGCAGCGACTGATGCAGGTTTGGAAGCAGTGATGGAATTTGCATCTTCACTTTTGAAAGGAAAGAATGCTAATAAATCAAAGAAACATGGAGTTCTATCTGTTCGTGCTGCGTCTATGTTGGAGGCAGAACGTGATTTGTCAAAAAAGTGGAGTCCTGTTGTGGAAATGCAATATAGGGGAGGAAGATACAAGGGACGATGCCAAGGAGGTCTACCGGAAGGGAAgGGGCGTCTTGTTCTCAGAGATGGAAGTATATATGATGGTTTATGGCGCTATGGTAAGAGATCAGGTCCAGGTACATTCTATTTCAAAAATGGAGATATGTTTCAAGGATCATGGAGGGATGATGTCATACACGGCAAGggtatatttatacataatgtGATTCTTCTATCAACCGTTACCAAATGTGGATTCTGTTACCAAAACGTTTTATGTGTCAGGGTTGGTTTTATTTTCACACCGGTGATCGGTGGTTTGCAAACTTTTGGAAGGGAAAGGCTAATGGTGAGGGGCGGTTCTACACAAAGTCTGGTGATGCCTTCTTTGGCAATTTCAAAGATGGATGGCGACATGGCCAGTTTCTTTGTATTAATGCGAATGGGACAAGGTACATTGAAATATGGGAACATGGTGTTCTTGTAG 2385 0.4025 MELSALPSFKAVSNASLFPFSSNQVCCRCSLRLRRRDYGLCSSPKSKPFVRIRMCSEKGSSSNGHGGIESGETKSDFVEVIGIGSRKDAVFDFCFNSPFQLPSLRFWNILMKESQEVQLQQRSIEEEPHPRIVKAPVFLKSCSKTIVLVASAGYGLYDTVVADIFETVRSRNGLTVAIVLKPFRFEGLRRQDEVKALMQKLRENTNLLIEIDIDALLEKDLLTLDEAMKTANDAVSLAIKAVSVIKSEMHRKFIDRLNDSMKEASTSEINKMLESYKEAGIGFGAAYNIKASILQSIFDSPFLGVRLKDPNSIVICILACSVPINDSNIAIFLRTFRQTTEYTRDIIISTICDPTVEPNLLITTVLTLGCLNVQRSSQNGGILSRLALRFPLIFSFWGRHNQGQVGSRKQTEVFPHEVMSTDDIDERTNRIASDDIDSNLDKYYEELEPAMTNNSSKLPVSRDSVKNEEDLFDTTSNYNILYDSITKGVALGDSAFQREQLENWNLGPGFEMAKEWAQEKAADATPIVDNLSIFYLPVGVRPSEELKDSLEISFMTKQHEPDTDNDMKAQTLNGGLSPWSAATDAGLEAVMEFASSLLKGKNANKSKKHGVLSVRAASMLEAERDLSKKWSPVVEMQYRGGRYKGRCQGGLPEGKGRLVLRDGSIYDGLWRYGKRSGPGTFYFKNGDMFQGSWRDDVIHGKGIFIHNVILLSTVTKCGFCYQNVLCVRVGFIFTPVIGGLQTFGRERLMVRGGSTQSLVMPSLAISKMDGDMASFFVLMRMGQGTLKYGNMVFL 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0250 794 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 640 706 - -
Ssu7g0250 794 Pfam MORN repeat 666 688 IPR003409 -
Ssu7g0250 794 Pfam MORN repeat 648 664 IPR003409 -
Ssu7g0250 794 Pfam MORN repeat 689 704 IPR003409 -
Ssu7g0250 794 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 1 704 - -
Ssu7g0250 794 Gene3D Tubulin/FtsZ, GTPase domain 114 368 IPR036525 -
Ssu7g0250 794 PRINTS Cell division protein FtsZ signature 267 288 IPR003008 GO:0005525
Ssu7g0250 794 PRINTS Cell division protein FtsZ signature 173 194 IPR003008 GO:0005525
Ssu7g0250 794 SUPERFAMILY Tubulin nucleotide-binding domain-like 79 243 IPR036525 -
Ssu7g0250 794 SMART morn 687 708 IPR003409 -
Ssu7g0250 794 SMART morn 664 685 IPR003409 -
Ssu7g0250 794 SMART morn 641 662 IPR003409 -
Ssu7g0250 794 Gene3D - 645 714 - -
Ssu7g0250 794 PANTHER PROTEIN ACCUMULATION AND REPLICATION OFS PROTEIN 1 704 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0250 3 704 PP2C-type Phosphatase Gene Family AT1G75010 41.193 5.37e-159 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0250 - - gsj:114371951 1226.85