Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0244 atgggtaGTTGTGGTAGAGAAGGAGCAGTGAGGCAATATGTAAGATCGAAGGTTCCTCGTTTAAGATGGACTCCTGAGCTGCACCGCTGCTTTGTTCATGCCATTGATAGCCTTGGAGGTCATCATAAGGCTACTCCGAAGCTTGTTCTTCAGTTGATGGATGTTAAAGGGCTCACAATTTCACACGTCAAGAGCCATCTTCAGATGTACAGAAGCATGAGGGGTGACTTGGGCAGACAAGGTAGGACACCCTCCCAGCATAGAAACCAATCTTTTGAGGAGCATGATGATGGGTGTGTTGATGAAGTGAATGATGTTGGTGTTGAGTACTCTTGCTCGAAACCCATGGGAAGAGAATCTGATTCCTTCTTCGGCCACAGTAATCTCCCTCCAAAAAGAGCTAGAATCGAGACGAGGAGTTCCATATCAGAGAGCCTGCAATGCAGCCAAAGATTATGTGATGCAGTTCCAAATCCGTACTGTTTTTATGATTATCTGCAGCCCATGGCTGAGCACAAGGGAATAAAGGAGTTATGTGAAGCTTCAACATGGCAGACACAACCTCATTCCGCTCTGCTACCAGATTTTCCCAGCCTCACTTCATTCAAATGTCCTAACCAACAATCTGAGTTCCTCCAGGTTACTAAATTAAATGAAGGGAAGAGCACTTCACAGCCAATTAATGTACTTGTGAACCCTAAGACAGTGCATGCAGAAGTTGAAGATGTAGGAGGGTATGAATTGTCGTTGTCGCTCACATTGCCAAATCCTTCCCCTCAGAGAAGTAATACTTCTTCGGCCAGTGAGATCAGTGAGGCAATCTCATCATGCCCTGGGTTTAGCAACTACAAGGGCTGCTCTAGTTCGTCCACTGtcaaagaaagaattaatttggACCTATCTTTAGCCCTATGTGGCAATTGA 924 0.4437 MGSCGREGAVRQYVRSKVPRLRWTPELHRCFVHAIDSLGGHHKATPKLVLQLMDVKGLTISHVKSHLQMYRSMRGDLGRQGRTPSQHRNQSFEEHDDGCVDEVNDVGVEYSCSKPMGRESDSFFGHSNLPPKRARIETRSSISESLQCSQRLCDAVPNPYCFYDYLQPMAEHKGIKELCEASTWQTQPHSALLPDFPSLTSFKCPNQQSEFLQVTKLNEGKSTSQPINVLVNPKTVHAEVEDVGGYELSLSLTLPNPSPQRSNTSSASEISEAISSCPGFSNYKGCSSSSTVKERINLDLSLALCGN 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0244 307 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 1 307 IPR044848 GO:0003700
Ssu7g0244 307 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 307 - -
Ssu7g0244 307 SUPERFAMILY Homeodomain-like 17 72 IPR009057 -
Ssu7g0244 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 75 IPR017930 -
Ssu7g0244 307 MobiDBLite consensus disorder prediction 76 96 - -
Ssu7g0244 307 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 19 72 IPR006447 GO:0003677
Ssu7g0244 307 Pfam Myb-like DNA-binding domain 21 71 IPR001005 -
Ssu7g0244 307 Gene3D - 18 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0244 Ssu-Chr7 4056724 4060005 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0244 1 74 G2-like Transcription Factor Family AT1G14600 75.949 3.56e-35 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Ssu7g0244 Myb_DNA-binding 1.2e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0244 - - gmx:100787188 475.707