Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0233 ATGTCAGATTGCAGCGACCAGAACGAGGAGGAGGAAGATGGAAAGTATAGGAGGAGGAATGGGAAAGGGAACCAGTCCAAGAACCTTGTGGctgagaggaagagaagaagaagctcAATGACAGGTGAACTTGGGCCAAACGCTGAACATGGTAAGGCCCAAACTGGGTTTCATGTGGGCACATCAGGGAATGCCTTTGTGTCCAAACAAAAGCAGGAAGATGCTACTGTCATTGACAAGCAGACCCAGCAGATGGAGCCGCAAGTGGAAGTGGCTCTCATAGATGGGAATGAGTATTTTGTGAAGGTGTTCTGTGAGCACAGGCCTGGTGGTTTTGTGAAATTGATGGAGGTATTCAACACTCTTGGCATGGATGTAGTGCATGCTACGGTAACCAGCCACAAGGGCCTCGTTTCAAATGTTTTTAAAGTGGAGAAAAAGGACAGCGAAACGGTTGAGGCTGAAGATGTAAGAGACTCACTGCTAGAGCTTACGCGGAACCGTTATAGAGGGTGGACTCATGAAATGACAGCAACGTCGGAAAATGATGTGGGCAGGGATCAACATCAACTCCACAACCCCCAGATGGGTGCCTATCACCCGCACCAATTTCATAGTTAA 621 0.4638 MSDCSDQNEEEEDGKYRRRNGKGNQSKNLVAERKRRRSSMTGELGPNAEHGKAQTGFHVGTSGNAFVSKQKQEDATVIDKQTQQMEPQVEVALIDGNEYFVKVFCEHRPGGFVKLMEVFNTLGMDVVHATVTSHKGLVSNVFKVEKKDSETVEAEDVRDSLLELTRNRYRGWTHEMTATSENDVGRDQHQLHNPQMGAYHPHQFHS 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0233 206 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 51 174 - -
Ssu7g0233 206 SUPERFAMILY ACT-like 97 165 IPR045865 -
Ssu7g0233 206 MobiDBLite consensus disorder prediction 181 206 - -
Ssu7g0233 206 CDD ACT_UUR-ACR-like 101 164 - -
Ssu7g0233 206 ProSiteProfiles ACT domain profile. 100 172 IPR002912 -
Ssu7g0233 206 MobiDBLite consensus disorder prediction 1 61 - -
Ssu7g0233 206 PANTHER TRANSCRIPTION FACTOR ABORTED MICROSPORES 51 174 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0233 2 179 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G16910 42.672 6.24e-45 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0233 - - gmx:100798282 341.273