Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0228 ATGGTTGTAATGCAAGCCAAGAAATGCATGGAAGACCGGTGGCAGATTGAATCAGGCAGTTTGTGCTCCAATCAATCTGGTGGCCCTCATGGTACCTTCATCGGTATCTATGACGGCCGTGGAGGGCCTCACACATCGCAGTTTATCAATGATTACCTATTTCACCGCCTCAAGAaaTTTACTTCAGGCCAACGATCAATGTCGGAGGAAGTAATTCGAAGGGCATTCCAAGCAACAGAAGATCGGTTTATGTCACTAGTTTCCAGACAGTGGTACTCTACACCAAATATTGCAACTGTAGGATCATGCTGTCTTGTTGGTGTTATTTGTAATGGAACTCTTTTTATAGCAAATCTTGGGAATTCCCGGGCTGTCTTGGGAAGTGCAGTCAAGGAAACTGGCGAGGTTTTAGCCATGCAATTATCGACAGAGCACAATTTATCTATAGAGTCTGTAAGACAGGAGCTGCAATCTTTGCATCCTGATGATCCAAATATCGTGGTTTTAAAGCATAATGCATGGCGTGTGAAGGGCATTCTTCATCTGCTAGAGATGGTTATTTAA 564 0.4362 MVVMQAKKCMEDRWQIESGSLCSNQSGGPHGTFIGIYDGRGGPHTSQFINDYLFHRLKKFTSGQRSMSEEVIRRAFQATEDRFMSLVSRQWYSTPNIATVGSCCLVGVICNGTLFIANLGNSRAVLGSAVKETGEVLAMQLSTEHNLSIESVRQELQSLHPDDPNIVVLKHNAWRVKGILHLLEMVI 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0228 187 PANTHER ALPHABET, ISOFORM E-RELATED 3 181 - -
Ssu7g0228 187 Pfam Protein phosphatase 2C 6 148 IPR001932 -
Ssu7g0228 187 ProSiteProfiles PPM-type phosphatase domain profile. 1 187 IPR001932 -
Ssu7g0228 187 CDD PP2Cc 3 180 IPR001932 -
Ssu7g0228 187 PANTHER PROTEIN PHOSPHATASE 2C 60-RELATED 3 181 - -
Ssu7g0228 187 Gene3D - 1 184 IPR036457 -
Ssu7g0228 187 SUPERFAMILY PP2C-like 7 182 IPR036457 -
Ssu7g0228 187 SMART PP2C_4 2 187 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0228 Ssu-Chr7 3702219 3703564 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0228 1 182 PP2C-type Phosphatase Gene Family AT3G51370 62.637 2.01e-83 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0228 - - gmx:100790374 266.159