Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0201 ATGTTGCTAGGCGCGGGTGCAGAGGACTTGATGCGTTTTATGCGAGAAGATGAAGCTGCAAAAACCATGAATCTCTTTGAAGGGGCGGCTGATGCTGGGAGAATCAGCAAATCAGCTTTGAAGAACTGGGTGGTCAATGCCTTCAGAGAAAGGAGAGCACTTGCTTTGACATTGAATGACACCAAAACCGCAGTGAACAAACTTCATCGAATGCTAAATTTTATAGTTGCAATTGTTATATTGGTTATTTGGCTCTTGATATTGGAATTTGCCACCACCAAATTTCTTCTCTTTGTGAGCTCACAACTTGTCTTGGTTGCATTTGTATTTGGAAACACCTGCAAGACCATATTTGAagcaattattttcttatttgtcatGCACCCATTTGATGTGGGAGATAGATGTGAAATTGATGGGGTTCAGATGGTGGTAGAAGAAATGAACATATTGACAACTGTATTTCTGAGATATGATAATCAAAAGATCATCATCCCTAACAGTGTCCTTGCTACCAAGGCCATATATAACTTTTACCGGAGTCCTGATATGGGAGATGCTATCGAATTCTGTATACATATAGCTACCCCGGTTGAAAAGATTTCAGTTATGAAACACAGAATACAAAGTTATATTGATAACAAGAAGGAGCACTGGTATCCTTCACCCTTCATAGTATTCAAGGATCACGAACAATTAAACATGGTGAGAATGGCTATCTGGCCAACTCACAGAATGAACTTCCAAGACATGGGAGAAAGGTTTGTCAGGAGATCCCTTTTGCTTGAAGAGATGATCAAGATTTTCAGGGAGCTTGACATTAATTACCGTCTCCTGCCCCTGGACATTAACGTGAGAGCCTTGCCTACCACTTCTGATCGGCTTCCACCTAGTTGGGCATCAATTCCAAGTTGA 915 0.4033 MLLGAGAEDLMRFMREDEAAKTMNLFEGAADAGRISKSALKNWVVNAFRERRALALTLNDTKTAVNKLHRMLNFIVAIVILVIWLLILEFATTKFLLFVSSQLVLVAFVFGNTCKTIFEAIIFLFVMHPFDVGDRCEIDGVQMVVEEMNILTTVFLRYDNQKIIIPNSVLATKAIYNFYRSPDMGDAIEFCIHIATPVEKISVMKHRIQSYIDNKKEHWYPSPFIVFKDHEQLNMVRMAIWPTHRMNFQDMGERFVRRSLLLEEMIKIFRELDINYRLLPLDINVRALPTTSDRLPPSWASIPS 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0201 304 Gene3D - 129 178 IPR023408 -
Ssu7g0201 304 Pfam Mechanosensitive ion channel 71 274 IPR006685 GO:0016020|GO:0055085
Ssu7g0201 304 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 8 297 IPR016688 -
Ssu7g0201 304 SUPERFAMILY Sm-like ribonucleoproteins 119 178 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0201 Ssu-Chr7 3342293 3344086 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0201 8 299 Mechanosensitive Ion Channel Family AT1G53470 71.284 1.62e-147 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0201 K22048 - gmx:100789882 543.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0201 7 3342293 3344086 Ssu7g0201 7 3342293 3344086 ECH