Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0199 atggtgatggtggtgatggaggGAAACGACAGTTGCGGCAGCGGAGTGCAGCACCATACGACGACGTCGTCGCCGGCGCAGAGCCGGCAACAGCGGCAGAAGGTGGAAGTTTACAATGAGATTCTTCGCCGGTTGAAGGATTCCGGCGACGAAGAGGCTATGCAGCCTGGCTTTCACGATCAGCTTTGGGCTCACTTCAATCGCCTTCCTACACGGTATGCGCTGGATGTGAATGTGGAAAGGGCGGCAGATGTTCTTATGCACAAGAGGTTATTGCATTTGGCACATGATCCTGCTAACAGGCTTTCAATTGAAGTTCGATTAGTTCAGGTTCATCCCATATCTGATGGAAACTCAGCTGACTGTTTCGAATCAGATGATCCTGGGATAGAATCTAGTCAAAGTTCTTCAAAGTACTCAAGCAGACAGAGTATACATCCACCTCCTGCTTTTGGTTCTTCTCCTAATCTTGAAGCACTGGCTCTTGAAGCAAATAATTCTGAAGGCGTAGAGGAGGAACAATCTGTACATGCCAATGTTCAATATTCACGGCCCATGCATGAAATCACCATCTCAACAGATGACAAGCCAAAGCTTCTCAGTCAGTTAACTGCTTTGCTTGCTGAGATTGGACTGAACATCCAAGAAGCACATGCCTTTTCCACAACTGATGGTTACTCATTAGATGTGTTTGTTGTTGAAGGATGGCCCTATGAGGAAACAGAAAAGCTTAAAGCTGCTTTGGAAAAAGAAGTCTTGAAGATTGAGAGACAGGTGAGGTCTAGTCCGCAATTGGTATCTTCTGTTGACGAGCCTGATCAAGCAAAGATGAAAAGCGAATTGGATCATTTGACAATTCCAACTGATGGGACAGATGTTTGGGAAATAGATCCTAAACATTTGAAATATGGAACTCAAATTGCATCTGGGTCATATGGTGAACTgTTTAAAGGTGTATATTGTAGCCAGGAAGTAGCCATCAAAGTTCTCAAGGCTGAGCATGTAAATTCAGAATTGCAGAGAGAGTTTGTGCAGGAAGTCTATATCATGAGAAAGGTTCGACACAAGAATGTTGTACAATTCATAGGAGCATGTACCAAGCCCCCACGCTTATGCATAGTAACAGaATTTATGTCTGGTGGAAGTGTGTATGACTACCTACATAAGCAGAAGGgcttttttaaatttcctacCCTGCTCAAAGTAGCTATTGATGTTTCTAAAGGAATGAACTACTTGCACCAACATAACATAATCCATAGGGACTTGAAGGCTGCCAACCTTTTGATGGATGAAAATTGTACTGTAAAGGTCGCTGATTTTGGGGTTGCTAGAGTTAAAGCTCAATCTGGCGTTATGACAGCAGAAACTGGAACATATCGATGGATGGCTCCTGAGGTTATTGAACACAAGCCATATGATCACAAGGCTgatgtatttagttttggaaTTGTTTTATGGGAGTTGCTCACTGGAAAGCTTCCATACGAATATTTAACCCCTCTACAGGCAGCTATAGGAGTGGTTCAAAaggtaatcttttttttattagacttCAGTGGTAGAATAAGCTACCAATTAATGTCTTGTTGCTTctga 1599 0.4109 MVMVVMEGNDSCGSGVQHHTTTSSPAQSRQQRQKVEVYNEILRRLKDSGDEEAMQPGFHDQLWAHFNRLPTRYALDVNVERAADVLMHKRLLHLAHDPANRLSIEVRLVQVHPISDGNSADCFESDDPGIESSQSSSKYSSRQSIHPPPAFGSSPNLEALALEANNSEGVEEEQSVHANVQYSRPMHEITISTDDKPKLLSQLTALLAEIGLNIQEAHAFSTTDGYSLDVFVVEGWPYEETEKLKAALEKEVLKIERQVRSSPQLVSSVDEPDQAKMKSELDHLTIPTDGTDVWEIDPKHLKYGTQIASGSYGELFKGVYCSQEVAIKVLKAEHVNSELQREFVQEVYIMRKVRHKNVVQFIGACTKPPRLCIVTEFMSGGSVYDYLHKQKGFFKFPTLLKVAIDVSKGMNYLHQHNIIHRDLKAANLLMDENCTVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAIGVVQKVIFFLLDFSGRISYQLMSCCF 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0199 532 ProSiteProfiles Protein kinase domain profile. 301 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0199 532 MobiDBLite consensus disorder prediction 7 33 - -
Ssu7g0199 532 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 19 511 - -
Ssu7g0199 532 MobiDBLite consensus disorder prediction 128 150 - -
Ssu7g0199 532 ProSiteProfiles ACT domain profile. 188 264 IPR002912 -
Ssu7g0199 532 Gene3D Phosphorylase Kinase; domain 1 291 379 - -
Ssu7g0199 532 PRINTS Tyrosine kinase catalytic domain signature 458 468 IPR001245 GO:0004672|GO:0006468
Ssu7g0199 532 PRINTS Tyrosine kinase catalytic domain signature 375 388 IPR001245 GO:0004672|GO:0006468
Ssu7g0199 532 PRINTS Tyrosine kinase catalytic domain signature 412 430 IPR001245 GO:0004672|GO:0006468
Ssu7g0199 532 PRINTS Tyrosine kinase catalytic domain signature 477 499 IPR001245 GO:0004672|GO:0006468
Ssu7g0199 532 CDD STKc_MAP3K-like 307 511 - -
Ssu7g0199 532 Gene3D Transferase(Phosphotransferase) domain 1 380 531 - -
Ssu7g0199 532 Gene3D - 185 258 - -
Ssu7g0199 532 MobiDBLite consensus disorder prediction 13 33 - -
Ssu7g0199 532 Pfam Protein tyrosine and serine/threonine kinase 301 505 IPR001245 GO:0004672|GO:0006468
Ssu7g0199 532 SMART serkin_6 301 528 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0199 532 ProSitePatterns Serine/Threonine protein kinases active-site signature. 418 430 IPR008271 GO:0004672|GO:0006468
Ssu7g0199 532 PANTHER SERINE/THREONINE-PROTEIN KINASE STY46-LIKE ISOFORM X1 19 511 - -
Ssu7g0199 532 Coils Coil 238 258 - -
Ssu7g0199 532 SUPERFAMILY ACT-like 186 252 IPR045865 -
Ssu7g0199 532 CDD ACT_TyrKc 186 253 - -
Ssu7g0199 532 MobiDBLite consensus disorder prediction 117 152 - -
Ssu7g0199 532 SUPERFAMILY Protein kinase-like (PK-like) 292 531 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0199 Ssu-Chr7 3292516 3303907 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0199 4 513 MAP Kinase Kinase Kinase AT4G38470 71.345 0.0 719
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Ssu7g0199 PK_Tyr_Ser-Thr 5.4e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0199 - - gmx:100805180 945.266
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0199 7 3292516 3303907 Ssu7g0199 7 3292516 3303907 ECH