Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0195 ATGATGTTGACACATTGCAATGAATTGTGCAAGCCAGTTTCCATTATGATTCTAGTTAACTTGGCTCTAGCTTTTGTTAATTTACTTCTGAAGAAGGTTCTTAATGAAGGAATGGACTACATGTCTATTATAACATATCGACAGGCAATTTCATTTATCTTCATGACACCTATTGCCTGCTTCTATGACAGGAAACACAAACTGGAGCTTCACGTAGTATGTCTTTTTATCCTCAGTGCTCTTCTCGGAGTAACACTTCCCCAGTACCTATTTCTTCTTGGACTTGATTATACGTCTGCCACATTCTCATGTGCGTTCCTCAACATGGTGCCTGTATTTACGTTCATTATGGCAGTGCCATTTGGGATAGAAAAGGTGAACATGCAAAGCAAGAGTGGTAAAGCCAAAGTCTTGGGAACTTGTGTGTGCATTGGTGGCGCTTTGTTATTGGTCCTTTATAAAGGAATGCCCCTAATCAACCCACAATCGCAAGACATAGCAAAGTTAGTTATAAATACACCTCCAGCTGCCAAGTTAGAGAAATGGATTATAGGTTCCATACTTCTGACTGCAGGCTGCCTCCTGTGGTCTTCATGGTTCATTATACAAGCAAAGATTAGCAAAAAATACCCATGTCAATACTCTAGCACAGCTATTTTGTCACTTTTCGCAGCCATTCAATCAGCAATATTAACTCTGATCATCAAGAGAAATAATGCCTCGTGGATTCTCAAAGGAAAGCTAGAAATAATGAGCGTTATATATGCTGTAAGTATATTCTTTACAATAAcatacatcattttaaattgtctTGGAATAGTCTGTTTCTTTGCAAATTCTGAGTGCAACTCTAAATATCGATTTGCATTTCAAGTAGAAGATTCAACAATCCTGATTACCTGTTCAAGCCTTAACCTTCAAATTTGTTGGTTATGTGGGCCTAGGGACTGGTGGGGTCGGGCTTGTGCTACGTGGCAATGTCCTGGTGTGTCAAACAAAGGGGTCCAGTTTTTACCGCAGCTTTTACCCCCCTTATGCAGATATTTGTGGCCATGCTTGATTTCTCTGTACTAA 1074 0.3911 MMLTHCNELCKPVSIMILVNLALAFVNLLLKKVLNEGMDYMSIITYRQAISFIFMTPIACFYDRKHKLELHVVCLFILSALLGVTLPQYLFLLGLDYTSATFSCAFLNMVPVFTFIMAVPFGIEKVNMQSKSGKAKVLGTCVCIGGALLLVLYKGMPLINPQSQDIAKLVINTPPAAKLEKWIIGSILLTAGCLLWSSWFIIQAKISKKYPCQYSSTAILSLFAAIQSAILTLIIKRNNASWILKGKLEIMSVIYAVSIFFTITYIILNCLGIVCFFANSECNSKYRFAFQVEDSTILITCSSLNLQICWLCGPRDWWGRACATWQCPGVSNKGVQFLPQLLPPLCRYLWPCLISLY 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0195 357 PANTHER WAT1-RELATED PROTEIN 10 268 IPR030184 GO:0016021|GO:0022857
Ssu7g0195 357 Pfam EamA-like transporter family 14 151 IPR000620 GO:0016020|GO:0016021
Ssu7g0195 357 PANTHER WAT1-RELATED PROTEIN 10 268 - -
Ssu7g0195 357 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0195 Ssu-Chr7 3203889 3206656 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0195 2 258 Nodulin-like Gene Family AT3G30340 45.560 1.97e-78 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0195 - - gmx:100802053 455.292