Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0186 ATGTCGAGCTCCGACGGCACCGCCAACGGCTCAATGATCGAGGCGGCGCAGcggcagcagcagcagcagcagcaggcGCAGCCGTTAGCGGCGAAGAAGCCGCCGTCGAAGGACCGTCACAGCAAGGTCGACGGCCGCGGACGGCGCATACGGATGCCCATCATATGCGCGGCGCGCGTGTTCCAGCTCACGCGCGAGCTGGGGCACAAGTCCGACGGTCAAACCATCGAGTGGCTCCTCCGGCAGGCCGAGCCCTCCATCATCGCCGCGACCGGCACCGGCACCACCCCCGCCAGCTTCTCCTCCGTCTCCCTCTCGGTCCGCGGCGCCAACAACTCCCTCTCCTCCCTTTCCTCGACCTCCGACCACAAGCCCCAGTTGCTGGCTGCTCCCACGCCTTTTATCCTCGGCAAGCGCATACGCACCGACGAGGACTCTTCTAAAGACGAGGCCGTCTCCGTGGGCCCTTCTCTCGTGGGCCCGTCTACCCCGCCTGGACTGTGGGCCCTCCCGGCCCGGCCCGATTTCGGACAAATTTGGAGCTTCGCTGCCGCTCCCGAAATGGTGGTGCAGCCCACGGCGGTGTCGGTGTCGCAGCAGCAGCAAGCTTCGCTGTTCGCTCACCACCACCGTCAGCAGCAGCAACAAGCCATCGGAGAAGCTTCGGCGGCCAGGGTGGGGAATTACCTTCCAGGGCATCTGAATTTGCTGGCTTCGTTGTCCGGTGGGCCTGGGAATTCTGGTCGGAGAGACGATGAGCCTCGTTGA 768 0.6315 MSSSDGTANGSMIEAAQRQQQQQQQAQPLAAKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSSVSLSVRGANNSLSSLSSTSDHKPQLLAAPTPFILGKRIRTDEDSSKDEAVSVGPSLVGPSTPPGLWALPARPDFGQIWSFAAAPEMVVQPTAVSVSQQQQASLFAHHHRQQQQQAIGEASAARVGNYLPGHLNLLASLSGGPGNSGRRDDEPR 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0186 255 MobiDBLite consensus disorder prediction 1 30 - -
Ssu7g0186 255 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 1 252 - -
Ssu7g0186 255 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 252 IPR005333 GO:0003700
Ssu7g0186 255 MobiDBLite consensus disorder prediction 33 49 - -
Ssu7g0186 255 Pfam TCP family transcription factor 36 145 IPR017887 -
Ssu7g0186 255 MobiDBLite consensus disorder prediction 1 49 - -
Ssu7g0186 255 ProSiteProfiles TCP domain profile. 36 90 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0186 Ssu-Chr7 3116364 3117131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0186 7 255 TCP Transcription Factor Family AT5G23280 64.542 5.95e-100 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Ssu7g0186 TCP 7.6e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0186 K16221 - gmx:100799005 391.734