Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0182 ATGTCTCAGACATCCAGTGTCCTGCCTGCCTTCCACTCCATTAAGTCCTTGCCTCCTGAGTTCAAGTTTGCTAATAATCCTAACCCCGTTCTTGTGGAAAAACATGGAGATGCTAAATTTAGACGCACCAATCTGATTGGATCAAATGGTCTTGAAAATGGTGCACTGGTAGGGAAGGTTTCTAAGAAAGTTCACAGCCGTGTTGGTGGAATggatctttttgatgatgactcGCCATATGGTGGAAAAGGTAGATCATTAAAAGACTGTCCGTCTATTGCAGAGGAAGACCCGGCATCTGTTTCATTGCCCCTCCCATCGATTTTGACATCCTCTAGGGAAAGCCGTTGGAATGATACAAATCCTTATGGTTCAAAAAAGAAGCTTCAGTCTTGGCTTGAACTACCAAATGGGGATTGGGAGCTGGTAAAGATAATAACAACTTCAGGAGCTGAATCTGTCATTTCACTGCCTGACGGGAAAGTTTTAAAGGTGAAAGATGAGAGTTTGGTACCTGCTAATCCTGATATTCTTGATGGAGTGGATGACCTCATGCAACTAAGTTATTTAAATGAACCATCAGTTTTATTCAACCTGCAATATAGATACAatcaaaatatgatatatACGAAAGCTGGGCCCATTCTGGTTGCCGTAAATCCCTTTAAGAAAGTTCCTCTGTATGGTAATGACTATATAGAAGCATACAAGTGTAAAGCAATTGAAAGCCCTCATGTATATGTAATTACTGACACAGCCATCCGAGAAATGATACGAGGTAACTTTTTCCTTACATTTACATATATGGATGAAAGTGGAGCAGGCAAGACTGAGACAGCAAAAATAGCAATGCAGTACTTGGCTGCCCTTGGTGGTGGAAGTGGAATAGAGAATGAGATATTAAAGACTAATCCAATACTAGAAGCCTTTGGTAACggaaaaacattaagaaatgaCAACTCAAGTCGATTTGGGAAGCTCATTGAGATTCACTTCAGTGAAGCTGGGAAAATATCTGGTGCTAATATTCAAACATGTAAGTTTACACAGGATTCTAGAGTAGTGCAATGCAACGAAGGGGAAAGGTCATACCATATATTTTATCAGCTATGTGCTGGAGCACCATCATCTCTTAGGGAGAAGCTAAATCTACTAAGTGTGGAAGACTATAAATATCTGAGGCAGAGcaattgttattcaattactgGTGTTGATGATGCAGAAGAATTTCGCATGGTCAGGGAAGCTCTGGACATTGTCCACATTAGCAAAGGAGACCAGGAGAATGTATTTGCAATGCTTGCTGCAGTATTATGGTTAGGAAACATATCATTTACTGTGGTCGATAATGAAAATCATGTTCAAGCTGTTGAGGATGAGGGGCTGTTGACCGTTGCCCAGTTGGTTGGCTGTGAAATTGAAGACCTGAAGTTGACTTTATCAACTCGCAAAATGAAAGTTGGTAATGATAATATTGTCCAGAAGTTGACGCTATCTCAGGCTATTGATGCAAGAGATGCTTTGGCAAAGTCAATATATGCATGTCTGTTTGATTGGTTGGTTGAACAAATAAACAAATCACTTGCAGTTGGCAAAAGACGAACTGGCAGATCGATCAGCATTCTAGATATTTATGGCTTTGAGTCACTCAATAGGAACAGTTTTGAGCAGTTCTGTATAAATTATGCAAATGAGAGATTACAGCAACACTTCAATCGTCATTTATTCAAGTTAGAACAGGAGGAATATATCCAAGATGGCATTGATTGGGCTAAAGTTGAATTTGAAGACAACCAAGATTGCCTTAATCTTTTTGAAAAGAAACCACTGGGGCTACTATCCCTGTTAGATGAAGAGTCCACTTTCCCTAATGGCACAGATATAACGTTTGCTAACAAGCTTAAGCAGCATTTGAATTCCAATTCATGCTTCAAAGGAGAACGAGAAAAAGCCTTTACTGTGTGTCATTATGCAGGGGAGGTCACTTATGATACAACTGGATTCCTGGAAAAGAACAGGGACCTATTGCACTTGGATTCCATCCAACTTCTATCTTCAAGCAAATGTCATCTTCCTAAGTTATTTGCATCCCATATGCTTACTCAGTCCGAGAAGCCTGTAGTAGGTCCCTTACACAAGTCAGGTGGGGCAGATTCCCAAAAGCTAAGTGTTGCCACAAAATTCAAGGGACAATTGTTCCAATTGATGCAACGTTTAGAGAGTACTACACCACATTTTATACGCTGCATCAAGCCCAATAACCTCCAATCACCTGGATCATATGAGCAAAGCCTTGTACTGCAGCAGTTGAGATGTTGTGGGGTCCTGGAAGTGGTTCGAATATCAAGATCAGGCTTTCCAACTAGAGTGACTCACCAACAATTTGCCAGAAGATATGGTTTTCTTCTCCTTGAAAATGTTGCCTCTCAGGATCCGCTTAGTGTTTCAGTTGCTATTCTTCATCAGTTCAACATTTTGCCGGAGATGTATCAAGTTGGCTACACAAAATTATTCTTCCGAACAGGGCAGATTGGAGTACTGGAAGATACCAGAAATCGTACCCTGCATGGAATTTTACGTGTGCAAAGTTGCTTCAGGGGTTACCGAGCTCGTTGTTATCGCAAGGAGCTTAGGAGAGGAATCACTACTCTCCAATCATTTATTAGAGGAGACAAAAGCAGAAAGGAATATGCAGCTTTGCTTCAGAGACACAGGGCTGCTGTTATTATACAGAAGCGGATGAAAACAGTATTTGCAAGGAACAGAATGAAAACTATTAATGATGCTGCAGTTGTCATGCAATCATTTATTCGTGGTTGGTTAGTCAGAAGATGCTCAGGAGATATAGGATTATCAAAATCCGGAGGCACAAagATTAATGAGTCAGATGAGGTTCTGGTGAAGTCGTCTTTCCTGGCTGAATTACAGCGCCGGGTACTCAAGGCAGAAGCTGCcctgagagagaaagaagaggaaaatgaCATTCTTCACCAACGTCTTCAACAGTACGAGAGCAGATGGTCtgaatatgaattaaaaatgaaatccaTGGAAGAAGTATGGCAGAAACAAATGAGATCCCTACAATCTAGCCTCTCTATTGCGAAGAAGAGCCTTGCTATGGATGATTCTGGAAGAAATTCAGATGCTTCTGTTAATGCAAGTGATGAGAAGGATTACAGCTGGGATGTAGCAAGTAATCACAGACGCCAAGAAAGCAATGGGGCAAGATCAATGAGTGCTGGTTTGAGTGTTATAAGTCGGTTGGCTGAGGAATTTGAGCAGAGGAGTCAAGTATTTGGTGATGATGCTAAGTTCTTGGTAGAGGTAAAATCTGGTCAAGTTGAAGCAAGTTTGAACCCAGATAGAGAGCTTAGAAGGTTAAAACAAATGTTTGAAGCTTGGAAAAAGGATTATGGAGCAAGACTACGTGAAACAaaggtcattttacataaacttGGAAGTGAAGATGGATCAATtgagaaagtgaagaaaaagTGGTGGGGAAGAAGGAATAGTACAAGaataagttga 3534 0.3916 MSQTSSVLPAFHSIKSLPPEFKFANNPNPVLVEKHGDAKFRRTNLIGSNGLENGALVGKVSKKVHSRVGGMDLFDDDSPYGGKGRSLKDCPSIAEEDPASVSLPLPSILTSSRESRWNDTNPYGSKKKLQSWLELPNGDWELVKIITTSGAESVISLPDGKVLKVKDESLVPANPDILDGVDDLMQLSYLNEPSVLFNLQYRYNQNMIYTKAGPILVAVNPFKKVPLYGNDYIEAYKCKAIESPHVYVITDTAIREMIRGNFFLTFTYMDESGAGKTETAKIAMQYLAALGGGSGIENEILKTNPILEAFGNGKTLRNDNSSRFGKLIEIHFSEAGKISGANIQTCKFTQDSRVVQCNEGERSYHIFYQLCAGAPSSLREKLNLLSVEDYKYLRQSNCYSITGVDDAEEFRMVREALDIVHISKGDQENVFAMLAAVLWLGNISFTVVDNENHVQAVEDEGLLTVAQLVGCEIEDLKLTLSTRKMKVGNDNIVQKLTLSQAIDARDALAKSIYACLFDWLVEQINKSLAVGKRRTGRSISILDIYGFESLNRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVEFEDNQDCLNLFEKKPLGLLSLLDEESTFPNGTDITFANKLKQHLNSNSCFKGEREKAFTVCHYAGEVTYDTTGFLEKNRDLLHLDSIQLLSSSKCHLPKLFASHMLTQSEKPVVGPLHKSGGADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNLQSPGSYEQSLVLQQLRCCGVLEVVRISRSGFPTRVTHQQFARRYGFLLLENVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRTGQIGVLEDTRNRTLHGILRVQSCFRGYRARCYRKELRRGITTLQSFIRGDKSRKEYAALLQRHRAAVIIQKRMKTVFARNRMKTINDAAVVMQSFIRGWLVRRCSGDIGLSKSGGTKINESDEVLVKSSFLAELQRRVLKAEAALREKEEENDILHQRLQQYESRWSEYELKMKSMEEVWQKQMRSLQSSLSIAKKSLAMDDSGRNSDASVNASDEKDYSWDVASNHRRQESNGARSMSAGLSVISRLAEEFEQRSQVFGDDAKFLVEVKSGQVEASLNPDRELRRLKQMFEAWKKDYGARLRETKVILHKLGSEDGSIEKVKKKWWGRRNSTRIS 1177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0182 1177 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 9 1176 - -
Ssu7g0182 1177 CDD MYSc_Myo8 193 840 IPR036022 -
Ssu7g0182 1177 Gene3D Kinesin motor domain 182 781 IPR036961 -
Ssu7g0182 1177 ProSiteProfiles IQ motif profile. 926 955 IPR000048 GO:0005515
Ssu7g0182 1177 ProSiteProfiles IQ motif profile. 856 883 IPR000048 GO:0005515
Ssu7g0182 1177 PANTHER MYOSIN 9 1176 - -
Ssu7g0182 1177 PRINTS Myosin heavy chain signature 209 228 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ssu7g0182 1177 PRINTS Myosin heavy chain signature 538 566 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ssu7g0182 1177 PRINTS Myosin heavy chain signature 591 619 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ssu7g0182 1177 PRINTS Myosin heavy chain signature 263 288 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ssu7g0182 1177 PRINTS Myosin heavy chain signature 305 332 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ssu7g0182 1177 SMART MYSc_2a 173 853 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ssu7g0182 1177 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 900 IPR027417 -
Ssu7g0182 1177 Coils Coil 972 1020 - -
Ssu7g0182 1177 Gene3D - 362 421 - -
Ssu7g0182 1177 Gene3D - 786 850 - -
Ssu7g0182 1177 ProSiteProfiles IQ motif profile. 877 906 IPR000048 GO:0005515
Ssu7g0182 1177 Gene3D - 548 742 - -
Ssu7g0182 1177 ProSiteProfiles Myosin motor domain profile. 179 852 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ssu7g0182 1177 Gene3D Myosin VI head, motor domain, U50 subdomain 423 720 - -
Ssu7g0182 1177 SMART iq_5 876 898 IPR000048 GO:0005515
Ssu7g0182 1177 SMART iq_5 902 924 IPR000048 GO:0005515
Ssu7g0182 1177 SMART iq_5 925 947 IPR000048 GO:0005515
Ssu7g0182 1177 SMART iq_5 853 875 IPR000048 GO:0005515
Ssu7g0182 1177 Pfam IQ calmodulin-binding motif 928 944 IPR000048 GO:0005515
Ssu7g0182 1177 Pfam IQ calmodulin-binding motif 858 873 IPR000048 GO:0005515
Ssu7g0182 1177 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 126 175 IPR004009 GO:0003774|GO:0005524|GO:0016459
Ssu7g0182 1177 Pfam Myosin head (motor domain) 181 840 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ssu7g0182 1177 Gene3D - 856 904 - -
Ssu7g0182 1177 Gene3D - 905 946 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0182 Ssu-Chr7 3010158 3022685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0182 7 1175 Myosins gene family AT1G50360 74.295 0.0 1760
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0182 - - gmx:100801124 2154.79