Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0165 ATGCAGCAGCCGGAGGGGCAGATTGACGCGCCACCGGGAATGCCTCACCCGCCGCTCCGACCTCGCCGCAGGAGACGGAGGTCCGGTTTCCGCGCCGCCTTGAGGGTTTACGAGGCTCAGCCTCAGCCTCAGGTTCAGGTTAAGCTGGAACCAGAAGAAGAAGAGGCTGTACCGCAAATGCGGGTAACTAGTAATATAGACTATGACAAGGCCTATTTCGAATGTTATGCTCACATTGGCGTTCACGAGGAGATGATCaagGATCGTGTGCGGACTGATGCTTATAAGAATGCAATAATGCATcataagaaatttattaaaggcAAAGTTGTACTTGATGTTGGATGCGGTACTGGCATCCTTTCTATATTTTGTGCTGAGGCTGGTGCAAAGCGGGTGTATGCAGTTGAAGCAAGTAACATTGCCCTGAAGGCGAAAAGTGTTGTTACAGATAATAATCTTTCAAATGTTATCATGGTATTGCATGGACGACTTGAGGATGTTGAAATCAATGAAAAGGTCGATGTTATAATTTCAGAATGGATGGGCTATATGCTTCTATACGAGAGCATGCTTGGAAGTGTTATTACTGCCAGAGATCGCTGGCTCAGACCTGGAGGTCTAATGCTTCCTTCAAAGGCAacgTTGTACATGGCTCCTTTTACACATACCAAAAGATACCATGAAAGCGTTGACTTCTGGCTCAATGTTTATGGAATTGATATGTCTGCCATGCTACCATTAGCAAAACAGTATGCATTTGAGGAACCTTCTGTGGAGACAATTACTGGTGAAAATGTTTTGGCATGGCCTCAAGTGGTGAAATGTCTGAACTGTTATTCTGTTACCATTCCTGAGCTAGTATCTGTAACAACAAGGTTTAAGTTCAAGTCAATGGTGAGAGCTCCGCTACATGGTTTTGCATTTTGGTTTGATGTTGAATTTACTGGGCCAGTACTATCACCAATGCCAGTCAGTTTTCAGTTACCGACTTCATCTTTTGACGATCATCCAGTGGATAGTCAGAGAAAAGATTGGAGAAACCCTACACTGCTCCTGTCTACTGCACCTGAACACCCGCCAACACATTGGCAACAGACCTTGATATACTTTTATGAGCCAATAGACCTGGAAAAAGATCAACTTATTGAAGGAGGAGTGAGATTGTCACAAAGGCAAAACAATGCCCGGTTTCTGAATATTCACCTTGAATATGTGTTAGTCTGA 1227 0.436 MQQPEGQIDAPPGMPHPPLRPRRRRRRSGFRAALRVYEAQPQPQVQVKLEPEEEEAVPQMRVTSNIDYDKAYFECYAHIGVHEEMIKDRVRTDAYKNAIMHHKKFIKGKVVLDVGCGTGILSIFCAEAGAKRVYAVEASNIALKAKSVVTDNNLSNVIMVLHGRLEDVEINEKVDVIISEWMGYMLLYESMLGSVITARDRWLRPGGLMLPSKATLYMAPFTHTKRYHESVDFWLNVYGIDMSAMLPLAKQYAFEEPSVETITGENVLAWPQVVKCLNCYSVTIPELVSVTTRFKFKSMVRAPLHGFAFWFDVEFTGPVLSPMPVSFQLPTSSFDDHPVDSQRKDWRNPTLLLSTAPEHPPTHWQQTLIYFYEPIDLEKDQLIEGGVRLSQRQNNARFLNIHLEYVLV 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0165 408 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 76 405 IPR029063 -
Ssu7g0165 408 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 69 408 IPR025799 GO:0016274|GO:0018216
Ssu7g0165 408 Pfam Ribosomal protein L11 methyltransferase (PrmA) 107 180 - -
Ssu7g0165 408 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 64 406 IPR025799 GO:0016274|GO:0018216
Ssu7g0165 408 MobiDBLite consensus disorder prediction 1 27 - -
Ssu7g0165 408 CDD AdoMet_MTases 111 210 - -
Ssu7g0165 408 Gene3D Vaccinia Virus protein VP39 65 211 IPR029063 -
Ssu7g0165 408 Gene3D - 213 408 - -
Ssu7g0165 408 PANTHER BNAC03G41340D PROTEIN 64 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0165 Ssu-Chr7 2747615 2757330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0165 69 388 C2H2 Transcription Factor Family AT3G12270 37.202 5.39e-64 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0165 K11437 - gmx:100795672 547.74