Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0152 ATGTTTGTCCAGTGTATGaatgttgtttggtttaaaTGCGTATGCAGATTAAGGGGGGAAGCCATGGAAGAGATGTCAGGTTCAGCAACGGCAATAAATTCTTCCAATATAGGATTTCAGCTATTGAAGAAGCAAGGTTGGAAAGAAGGGACTGGTCTTGGAATATCTGagcagGGTAGATTAGAACCTGTGGAAACTTATGTAAAGAATAATAAACGAGGTTTGGGAGCAGATAAAGTGAAGAAAAAGGCTGTGAAAGTGAAACCTGATCATAGCGATTCCTCTAAAGGGAGCAATCAGCAGGATCATTTACctcaaaagaaaaccaaaacacTTTCTAAACGGATGAGAAAGATGCAGGAGTTTGAGAAGAAGATGCAGGAGAAGGAATTTGAGCGCGCTTTCTTCAGAGAGTTCTGGCCAGAAAATGTGTAA 435 0.3724 MFVQCMNVVWFKCVCRLRGEAMEEMSGSATAINSSNIGFQLLKKQGWKEGTGLGISEQGRLEPVETYVKNNKRGLGADKVKKKAVKVKPDHSDSSKGSNQQDHLPQKKTKTLSKRMRKMQEFEKKMQEKEFERAFFREFWPENV 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0152 144 PANTHER BAT4 PROTEIN-RELATED 20 144 IPR039146 -
Ssu7g0152 144 SMART G-patch_5 32 78 IPR000467 GO:0003676
Ssu7g0152 144 MobiDBLite consensus disorder prediction 78 124 - -
Ssu7g0152 144 Pfam G-patch domain 35 77 IPR000467 GO:0003676
Ssu7g0152 144 MobiDBLite consensus disorder prediction 78 97 - -
Ssu7g0152 144 ProSiteProfiles G-patch domain profile. 34 80 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0152 Ssu-Chr7 2598148 2600352 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0152 32 76 C2H2 Transcription Factor Family AT5G26610 53.333 9.27e-10 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0152 - - gmx:100812494 191.815