Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0112 ATGATCTCAAACGCGGACCCTGTAGAACCAGTCACGGCAGCCACCGCCGCCGCCGCAACAGCCGCCTCTTCTTCCAGTGAAGACCAGCCTGCACCGCCAGCGGCACCAAACATTGTGATGTCCTCCAGGGATCACGACTCTCTCTTCAGCGGTGGCGGCATCAGCTTTCTCTCTGGAAGTCGAAATGGAAGGTTCAGCTATGGATATTCCAGTTTCAAGGGTAAAAGGTCATCAATGGAGGATTTCTTTGAGACCAGAATATCAGAGGTTGATGGTCAGATGGTCgcattttttggtgttttcgATGgcCATGGAGGTTCCCGGACTGCAGAATATCTGAAAAATAATCTGTTTAAGAATTTGAGTAGCCACCCTGACTTTATCAAAGACACAAAGACTGCTATAGTTGAAGCATTTAAACAGACAGACGTTGATTACCTCAATGAGGAAAAGGGACATCAAAGGGATGCTGGGTCAACTGCATCAACTGCTATGTTGTTGGGGGACCGAATTGTTGTTGCAAATGTTGGTGATTCCAGAGTAGTTGCATGTAGAGCTGGTTCAGCTGTTCCTTTGTCTATCGATCACAAACCTGATAGATCCGATGAACGTCAAAGGATTGAACAGGCGGGGGGATTCATAATTTGGGCTGGAACATGGAGGGTTGGTGGTGTTCTTGCTGTTTCCCGTGCATTTGGAGACAAACTTCTTAAGCCATATGTTGTTGCTGACCCAGAAATTCAGGAGGAAGAAATTGACGGTgtagattttattataattgctaGTGATGGCCTTTGGAATGTCATATCAAACAAGGAGGCCGTGTCTTTAGTACAAAATATCACAGATGCAGAAGTGGCATCCAGAGAACTTATAAAAGAAGCTTATGCACGAGGAAGCTCAGATAACATCACTTGTGTTGTTGTTCGATTTGATCTATCCTGA 945 0.4402 MISNADPVEPVTAATAAAATAASSSSEDQPAPPAAPNIVMSSRDHDSLFSGGGISFLSGSRNGRFSYGYSSFKGKRSSMEDFFETRISEVDGQMVAFFGVFDGHGGSRTAEYLKNNLFKNLSSHPDFIKDTKTAIVEAFKQTDVDYLNEEKGHQRDAGSTASTAMLLGDRIVVANVGDSRVVACRAGSAVPLSIDHKPDRSDERQRIEQAGGFIIWAGTWRVGGVLAVSRAFGDKLLKPYVVADPEIQEEEIDGVDFIIIASDGLWNVISNKEAVSLVQNITDAEVASRELIKEAYARGSSDNITCVVVRFDLS 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0112 314 PANTHER ALPHABET, ISOFORM E-RELATED 32 314 - -
Ssu7g0112 314 ProSitePatterns PPM-type phosphatase domain signature. 97 105 IPR000222 GO:0043169
Ssu7g0112 314 PANTHER PROTEIN PHOSPHATASE 2C 11-RELATED 32 314 - -
Ssu7g0112 314 CDD PP2Cc 65 311 IPR001932 -
Ssu7g0112 314 MobiDBLite consensus disorder prediction 17 31 - -
Ssu7g0112 314 MobiDBLite consensus disorder prediction 1 42 - -
Ssu7g0112 314 Gene3D - 59 313 IPR036457 -
Ssu7g0112 314 ProSiteProfiles PPM-type phosphatase domain profile. 66 311 IPR001932 -
Ssu7g0112 314 Pfam Protein phosphatase 2C 67 304 IPR001932 -
Ssu7g0112 314 SMART PP2C_4 55 309 IPR001932 -
Ssu7g0112 314 SUPERFAMILY PP2C-like 59 312 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0112 Ssu-Chr7 2038271 2045982 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0112 38 314 PP2C-type Phosphatase Gene Family AT1G43900 75.090 4.94e-159 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0112 K17506 - gmx:100776867 568.926