Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0102 ATGACGACCCTATATTCTGGTAACGTGGCACTGGGGACGAATTATAGATTAAAGgtatcttttataaaagttaatattgtTCCAATCGGAATATTACAGCATGATAAGGGTCCACTTCTCCACATCCTCCATATAGCATATTGCTTTAGTCAAAATATACATTCTTTCTTAGATATGATTGAATTTATATCAGTTGACCCGGAGGTTTCGGCTCAGTTATCCACAAAATTCTATGATAAAAGTTGTCCCAAAGCCCTTACCACCATTAGGAAAGCAGTGGAAGATGCTGTGCGCAATGAGAGTCGCATGGGGGCATCCTTGCTCCGACTCCACTTCCATGACTGCTTCAAATTGATATTCTATTTTCACGTACAGGGATGTGATGCGTCAGTATTGTTAGACGACACGGCAAATTTCACGGGCGAGAAGAGTTCATTTCCCAATGCTAACTCCCTTAGGGGTTTTGAGGTCATAGACAACATAAAATCTAAGCTGGAGGGCATGTGCGAAGGCGTTGTCTCTTGTGCTGACATCTTAGCCGTTGCCGCGAGAGACGCTGTTGTTGCTCTTGGTGGAAAAAAATGGGACGTACAATTAGGCAGAAGAGATTCAACCACAGCAAGTTTGGATGAATCTAATTCAGACTTACCAGCTCCCTTTTTGGATCTTAGTGGCCTCATCACTGCTTTCGCCAAGAAAAATTTCACTACCGAAGAACTGGTTACTTTATCAGGTGCTCACACAATAGGCCTAGTGAGGTGCAGTTTCTTCAGAGCGAGGATTTATAACGAGACCAACATAGATCCCACATTTGCAAAACAAATGCAAGCAGGGTGTCCCTTCGAAGGTGGTGACAACAATTTCTCTCCTTTCGATTCCACCACTCCATTCAAATTTGACAATGCATACTACAAGAACTTGGTGCAGCTAAAGGGTCTGGTACACTCGGACCAACAACTCTTCACGAACAATGGATCTGGTCCCACAAACTCCCAAGTGGTTAGATTTAGCAGAGACATGGGAAATTTCAAAGAGGACTTCGCAGATGCAATGTTTAAGATGAGCATGCTGACCCCACTAACTGGCTCCGACGGTGAGATCAGGAAAAACTGCAGGGTAGTCAATCCATCAACTACTGTCTCGTGA 1146 0.4319 MTTLYSGNVALGTNYRLKVSFIKVNIVPIGILQHDKGPLLHILHIAYCFSQNIHSFLDMIEFISVDPEVSAQLSTKFYDKSCPKALTTIRKAVEDAVRNESRMGASLLRLHFHDCFKLIFYFHVQGCDASVLLDDTANFTGEKSSFPNANSLRGFEVIDNIKSKLEGMCEGVVSCADILAVAARDAVVALGGKKWDVQLGRRDSTTASLDESNSDLPAPFLDLSGLITAFAKKNFTTEELVTLSGAHTIGLVRCSFFRARIYNETNIDPTFAKQMQAGCPFEGGDNNFSPFDSTTPFKFDNAYYKNLVQLKGLVHSDQQLFTNNGSGPTNSQVVRFSRDMGNFKEDFADAMFKMSMLTPLTGSDGEIRKNCRVVNPSTTVS 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0102 381 ProSitePatterns Peroxidases proximal heme-ligand signature. 239 249 IPR019793 -
Ssu7g0102 381 ProSitePatterns Peroxidases active site signature. 104 115 IPR019794 GO:0004601
Ssu7g0102 381 Gene3D Peroxidase, domain 2 217 355 - -
Ssu7g0102 381 SUPERFAMILY Heme-dependent peroxidases 72 375 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ssu7g0102 381 PANTHER PEROXIDASE 72-RELATED 60 377 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g0102 381 CDD secretory_peroxidase 72 374 IPR033905 GO:0004601|GO:0042744
Ssu7g0102 381 ProSiteProfiles Plant heme peroxidase family profile. 72 375 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu7g0102 381 PANTHER PEROXIDASE 60 377 - -
Ssu7g0102 381 Pfam Peroxidase 90 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu7g0102 381 Gene3D - 77 375 - -
Ssu7g0102 381 PRINTS Plant peroxidase signature 106 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g0102 381 PRINTS Plant peroxidase signature 349 362 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g0102 381 PRINTS Plant peroxidase signature 238 250 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g0102 381 PRINTS Plant peroxidase signature 153 166 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g0102 381 PRINTS Plant peroxidase signature 290 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g0102 381 PRINTS Plant peroxidase signature 306 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g0102 381 PRINTS Plant peroxidase signature 172 182 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g0102 381 PRINTS Plant peroxidase signature 191 206 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g0102 381 PRINTS Plant peroxidase signature 82 101 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g0102 381 PRINTS Haem peroxidase superfamily signature 191 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu7g0102 381 PRINTS Haem peroxidase superfamily signature 239 254 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu7g0102 381 PRINTS Haem peroxidase superfamily signature 292 307 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu7g0102 381 PRINTS Haem peroxidase superfamily signature 104 118 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0102 Ssu-Chr7 1903407 1907629 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0102 69 375 Peroxidase AT5G05340 56.634 8.37e-119 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0102 K00430 - gmx:100802244 545.043