Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0099 ATGTCATCTCGCATTGTTGCGCAGAATTCATTATCGGTCACCAATGCAGCGACGCCGTATTTCGACCTAATGGAACTGGACGACCGCACCCGCCGCCCCGTCTCCGGCGACATGCCGACGCTCGGACAGCTCCTCAAGCACGTCGGAGACGCACGCAAGGAAGCCGCTGGCGACGGAAGCGAGACGCCGGTGCACCACGCGCTCGACATCGCCGACGCCGCCGGAATCGAGCCTCGCTCGCTGCCGTTCGTCCTCTCCTTCAGCAACCTCACCTACAGCGTCAAGGTGCGCCGCAAAATGAGCCTCTCCTCGATCCTCCCCCGCCTCGGGGCCCGCCTCGGCGCGGCGGCGGTGACGGAGTCACCGGCAGTCGGGGAGAACATGTTCACGCGGACGAAAACTCTGCTCGACGATATCTCCGGCGAGGCGCGCGACGGCGAGATCATGGCGGTCCTCGGCGCCAGCGGTTCGGGAAAGTCAACCCTAATCGACGCGCTGGCGAACCGAATCGCCAAAGGAAGTCTGAAAGGAACGGTGGCGCTGAACGGCGAAGCACTTGAGTCGCGTCTTCTGAAGGTGATTTCCGCGTACGTGATGCAAGACGACCTCCTCTTCCCAATGCTCACGGTGGAAGAGACTCTGATGTTCGCGGCGGAGTTCCGCCTGCCGCGCACGCTCTCCAAGTCGAAAAAACAAGCACGCGTGCAGGCTCTAATCGACCAGCTAGGGCTCCGGAACGCCGCGAAAACGGCTATCGGCGACGAAGGCCACCGCGGAGTCTCCGGCGGCGAGCGGCGGAGAGTTTCTATCGGCATCGACATAATCCACGACCCGATCCTGCTGTTCCTGGACGAGCCAACCTCTGGACTCGACTCCACGAGCGCGTTCATGGTGGTGAAGGTGCTGCAGAGAATCGCGCAGAGCGGAAGCATCGTCATCATGTCCGTTCACCAACCGAGTTACCGGATCCTAGGGCTTCTCGACCGCATGATCTTCTTATCGCGCGGCCAAACCGTTTACAGCGGTTCGCCGATGCAGTTGCCGCTTTTCTTCGCCGAGTTCGGTCATCCGATTCCAGAAACCGATAACAGAACGGAGTTCGCGTTGGACCTGATTCGCGACCTCGAAGGGTCTCCCGGCGGAACGAAGAGCTTGGTTGAGTTCAACAAGTCGTGGCAGAGCATGACGAAGCATAATCAACAAGGAATGGAAACGACAATAGAAGCTGAACGAAACGGCTTGTCGTTGAAGGAGGCAATAAGCGCTAGTATTTCGAGAGGGAAGCTGGTGTCTGGCGCCACGAATACTAACCCGAACCCGTCGTCTATGGTGCCGACTTTTGCGAATCCGTTTTGGGTTGAGATGGCGACGCTGTCGAAACGGTCGTTTACGAATTCGCGGAGAATGCCTGAGTTGTTTGGGATTAGATTGGGTGCGGTGATGGTCACGGGGTTTATTCTGGCCACCATGTTTTGGCAACTGGATAACTCTCCCAAAGGAGTGCAAGAGAGGTTGGGATTCTTCGCGTTTGCGATGTCGACCACTTTTTACACTACCGCTGACGCGCTCCCTGTGTTTCTGCAAGAGCGGTACATTTTCATGAGGGAAACTGCTTACAACGCATATCGCAGATTGTCGTATTTGGTCTCGCATGCGCTCGTTGCGTTGCCTTCGTTGGCGTTTCTCTCGCTGGCTTTCGCGGCAACCACGTTTTGGGCCGTGGGCCTGGACGGGGGAGTTTCGggctttttgtttttctttctgatAATATTCGCCTCCTTTTGGGCGGGGAACTCCTTCGTGACGTTCCTATCGGGTGTGGTGCCTCACGTGATGCTGGGTTACACTATCGTGGTTGCAATTCTGGCGTATTTCTTGTTGTTCAGTGGGTTCTTCATCAACAGGGACAGGATTCCGAGTTACTGGATTTGGTTCCACTACTTGTCGCTGGTGAAATACCCTTACGAAGCTGTTTTGCAGAACGAGTTCGATGACCCGGTGAAGTGCTTCGTGAGGGGGGTGCAGATTTTCGATAACACGCCTCTTGGGTCGGTGCCGGAGGCTCTGAAGCTGAAGCTGTTGGACAGCATGAGCAACACGCTGGGAACGAAGATCACGAGCTCCACGTGCTTGACCACGGGGACTGATATATTGAGCCAGAATGGGGTCACCGATTTGAGCAAGTGGAATTGCTTCTGGATCACTGTGGCCTGGGGATTCTTCTTTAGGTTCCTCTTCTACTTGTCCTTGTTGGTGGGAAGCAAGAACAAGAGGAGGTGA 2280 0.5614 MSSRIVAQNSLSVTNAATPYFDLMELDDRTRRPVSGDMPTLGQLLKHVGDARKEAAGDGSETPVHHALDIADAAGIEPRSLPFVLSFSNLTYSVKVRRKMSLSSILPRLGARLGAAAVTESPAVGENMFTRTKTLLDDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKGSLKGTVALNGEALESRLLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKQARVQALIDQLGLRNAAKTAIGDEGHRGVSGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAFMVVKVLQRIAQSGSIVIMSVHQPSYRILGLLDRMIFLSRGQTVYSGSPMQLPLFFAEFGHPIPETDNRTEFALDLIRDLEGSPGGTKSLVEFNKSWQSMTKHNQQGMETTIEAERNGLSLKEAISASISRGKLVSGATNTNPNPSSMVPTFANPFWVEMATLSKRSFTNSRRMPELFGIRLGAVMVTGFILATMFWQLDNSPKGVQERLGFFAFAMSTTFYTTADALPVFLQERYIFMRETAYNAYRRLSYLVSHALVALPSLAFLSLAFAATTFWAVGLDGGVSGFLFFFLIIFASFWAGNSFVTFLSGVVPHVMLGYTIVVAILAYFLLFSGFFINRDRIPSYWIWFHYLSLVKYPYEAVLQNEFDDPVKCFVRGVQIFDNTPLGSVPEALKLKLLDSMSNTLGTKITSSTCLTTGTDILSQNGVTDLSKWNCFWITVAWGFFFRFLFYLSLLVGSKNKRR 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0099 759 CDD ABCG_EPDR 84 342 - -
Ssu7g0099 759 Pfam ABC-2 type transporter 317 377 IPR043926 GO:0140359
Ssu7g0099 759 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 113 360 IPR003439 GO:0005524
Ssu7g0099 759 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 15 753 - -
Ssu7g0099 759 Gene3D - 127 349 IPR027417 -
Ssu7g0099 759 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 131 347 IPR027417 -
Ssu7g0099 759 PANTHER ABC TRANSPORTER G FAMILY MEMBER 6-LIKE 15 753 - -
Ssu7g0099 759 Pfam ABC-2 type transporter 457 663 IPR013525 GO:0016020|GO:0140359
Ssu7g0099 759 SMART AAA_5 145 337 IPR003593 -
Ssu7g0099 759 ProSitePatterns ABC transporters family signature. 260 274 IPR017871 GO:0005524
Ssu7g0099 759 Pfam ABC transporter 136 288 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0099 Ssu-Chr7 1875096 1877375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0099 135 320 Calmodulin-binding Proteins AT2G36910 30.688 1.05e-11 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0099 K05681 - gmx:100803658 1285.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0099 7 1875096 1877375 Ssu7g0099 7 1875096 1877375 ECH