Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0094 ATGTACCAGACGATATCCCTCTCCCTCCCATTGCAAGCAGCAGCAAGCCAGCAAGCATTCCATTCCATTGTTGCAGGAGCAACTAGAGTTCGGGTTAGGCTATCATATGCACTGAGTAAACGACGTCGTATCCACGCCGGAAGTTGTGCAATGCCATTTCGAGCTCGCACTGCAACTGCAAGTCTCTGGTGGTCTCTGCAAACCGTTTTCAACACTCACCACACTCATTCTCTTCACCCTTCTTCCATTCACCTCAACTTCCATTCTCTGGCTTTGTCAAAACCTCAGTTTTCTGGCAATTGCGATGAATTTTTGCCATGGTTAGAGCGGAAAGCTGGTTCTACGATTTCGTCCTCACTTTTCATTGGGAAATCTTCGTATGGAAGGTCTCTGTTTGCTTCTAAGATAATACAAACTGGAGATTGCATTTTAAAGGTTCCTTACAGAGTGCAAATAACTGCAGATAATCTCCTTCCTGAAATCAGATCTTTGATTGGTGAGGAAGTTGGAAATATTGCGAAACTTGCTATTGTTGTTCTGATTGAGAAGAAATTGGGTCAGGGCTCTGAGTGGTATCCTTATATCAGCTGCCTTCCCCAGCAAGGGGAGCTGCACAATATGgtattttggAATGAAAGTGAGTTGGAGATGATTCGTCCAAGTTCAGTTTATCAGGAAACTATTGACCAAAAATCTCAAATTGAAAAGGACTTTTTGGCAATCAAGCCTGTTTTTGAATGTTTCCATCAACGTTTTGGAGATTTTACCTACGAGGACTTCATGCATGCATGCACACTAGTTGGTTCTCGAGCATGGGGAAGCACAAAGGGTTTAGCTCTGattcCATTTGCAGATTTCCTAAACCATGATGGAGTTTCAAAAGCAATTGTAATGAgcgatgatgacaaacaatgcTCAGAAATTATTGCTGATCGTGACTATGCCCTTGGTGAACAGGTACTAATAAGATATGGAAAGTTTTCAAATGCTACATTGATGCTGGACTTTGGTTTTACAATTCCATATAACATTTACGATCAGGTTCAGATCCAGTTTGATATACCTGAGCATGATCCTCTGCATGACATGAAGTTGGAATTATTGCATCGATACTTTGTACCTCCACCTGAAGATATGAAGGGCTTGACATATCCTGTGAAATCCTTCAGTATCAAGGAGGTGAGATCTGATAGAGGAAAAGGGAAGGGTCTTCCACAATCACTTCGTGCGCTTGCTCGTGTTCTTTCTTGTACCACATCTCAGGAACTTGACGATTTGGTCGTGGAAGCTGCACAAACTGATGGTAGGCTGGCTAGGCGCCCTTTACAGGATATCAGCAAAGAGATACAAGCACACATGATGTTGTTATCATTATTCATCCAATTAATTGAGGAGCACAATGCGACTATTATGTCACTGGATTCTTCCTATTCTCCCTCCTTGCGTGAAAGACTTTCTGTTAGAAGACTAATGGCTCGAGATCTCCTACATGGTGAGCTTCGCATTCTCAAATCTGCTTCTGCCTGGCTGGAGAACTACTGTTTTTCCTTGACTTGA 1557 0.4175 MYQTISLSLPLQAAASQQAFHSIVAGATRVRVRLSYALSKRRRIHAGSCAMPFRARTATASLWWSLQTVFNTHHTHSLHPSSIHLNFHSLALSKPQFSGNCDEFLPWLERKAGSTISSSLFIGKSSYGRSLFASKIIQTGDCILKVPYRVQITADNLLPEIRSLIGEEVGNIAKLAIVVLIEKKLGQGSEWYPYISCLPQQGELHNMVFWNESELEMIRPSSVYQETIDQKSQIEKDFLAIKPVFECFHQRFGDFTYEDFMHACTLVGSRAWGSTKGLALIPFADFLNHDGVSKAIVMSDDDKQCSEIIADRDYALGEQVLIRYGKFSNATLMLDFGFTIPYNIYDQVQIQFDIPEHDPLHDMKLELLHRYFVPPPEDMKGLTYPVKSFSIKEVRSDRGKGKGLPQSLRALARVLSCTTSQELDDLVVEAAQTDGRLARRPLQDISKEIQAHMMLLSLFIQLIEEHNATIMSLDSSYSPSLRERLSVRRLMARDLLHGELRILKSASAWLENYCFSLT 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0094 518 Gene3D set domain protein methyltransferase, domain 1 97 338 - -
Ssu7g0094 518 Gene3D - 341 513 IPR036464 -
Ssu7g0094 518 Pfam Rubisco LSMT substrate-binding 356 503 IPR015353 -
Ssu7g0094 518 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 97 512 - -
Ssu7g0094 518 PANTHER OS01G0976450 PROTEIN 97 512 - -
Ssu7g0094 518 Pfam SET domain 128 325 IPR001214 GO:0005515
Ssu7g0094 518 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 350 513 IPR036464 -
Ssu7g0094 518 SUPERFAMILY SET domain 100 343 IPR046341 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Ssu7g0094 SET 3e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0094 K19199 - gmx:100818002 793.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0094 7 1796752 1808246 Ssu7g0094 7 1796752 1808246 ECH