Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0076 ATGGTGTCAGCTACAATTAGGCGATTTGTCTCACCCTGTTGGAGACCATTTGACGGGGGTGAAATTTCTAGTAGGAATGGAGATTCAAGTGGACGTGTCAATGGTTTGTTGTGGTATAAAGATTCGGGAAGACACGCACATGGTGAATTCTCAATGGCAGTTATTCAAGCAAATAATTTGTTGGAGGATCAAAGCCAACTTGAATCCGGCCCCTTGAGCTTAGCTGAGGGTAGTCCTCATGGAACTTTTGTTGGTATATATGATGGGCATGGGGGTCCAGAAACTTCCCGGTTTGTCAATGAATGTCTATTTAGAAATATCAAGAAATTTACTTTGGCAAATCATGGAATGTCAGCTGATGTTATCAACAAATCATTCTTTGCAACAGAAGAAGATTTTCTTTCTCTGGTAGAGAAGCAGTGGCTGCACAAGCCGCAGATAGCATCAGTTGGATCTTGCTGTTTAGTAGGCATAATATGTAACGGGGAGCTCTTTATTGCAAATGCAGGAGATTCTCGAGCAGTATTAGGTAGATTGGATGAGTCTACCAAAGAGATTAAAGCTGTTCAGCTATCCTCTGAGCACAATGCTAGCCTGGAACCTGTCAGAAAGGAGTTGCGCTCGTTGCATCCTGATGATCCGCAGATTGTGGTTATGAAGCACCAGGTCTGGCGCGTGAAGGGTCTGATTCAGGTTTCAAGATCCATTGGTGATGCTTATCTAAAGAGGGCACAGTTTAATAAAGCACCATTATTGTCAAAATTTCGACTACCAGAACCATTTGAGAAGCCAATCCTTACAGCTGAACCAGCAATACTAGTACAGAGACTCTGTCCTAAAGATCAGTTTGTTATATTTGCATCAGATGGGTTATGGGAGCACGTGAGCAATGAAGAAGCAGTTGACATTGTCCAGAGCTGTCCACGGAATGGAGTAGCGAAGAAACTCATCAAAACTGCACTTTGTGAAGCTgcgaagaaaagagaaatgagaTACTCAGACTTGAAAAAGATTGACCGAGGGGTGAGGAGACATTTCCATGATGACATCACAGTTATAGTTTTGTATCTTGATCCACATTTTTTGACCCGTGCCAATTCACGTGTACCCTTGGTTTCGGTCAAAGGAGGTGGTCATAATGGTTATGATATTGGTATTATAGATGCCTAG 1170 0.4188 MVSATIRRFVSPCWRPFDGGEISSRNGDSSGRVNGLLWYKDSGRHAHGEFSMAVIQANNLLEDQSQLESGPLSLAEGSPHGTFVGIYDGHGGPETSRFVNECLFRNIKKFTLANHGMSADVINKSFFATEEDFLSLVEKQWLHKPQIASVGSCCLVGIICNGELFIANAGDSRAVLGRLDESTKEIKAVQLSSEHNASLEPVRKELRSLHPDDPQIVVMKHQVWRVKGLIQVSRSIGDAYLKRAQFNKAPLLSKFRLPEPFEKPILTAEPAILVQRLCPKDQFVIFASDGLWEHVSNEEAVDIVQSCPRNGVAKKLIKTALCEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVLYLDPHFLTRANSRVPLVSVKGGGHNGYDIGIIDA 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0076 389 Gene3D - 37 367 IPR036457 -
Ssu7g0076 389 SUPERFAMILY PP2C-like 74 359 IPR036457 -
Ssu7g0076 389 PANTHER ALPHABET, ISOFORM E-RELATED 8 379 - -
Ssu7g0076 389 SMART PP2C_4 41 355 IPR001932 -
Ssu7g0076 389 ProSitePatterns PPM-type phosphatase domain signature. 83 91 IPR000222 GO:0043169
Ssu7g0076 389 CDD PP2Cc 50 357 IPR001932 -
Ssu7g0076 389 PANTHER PROTEIN PHOSPHATASE 2C 38-RELATED 8 379 - -
Ssu7g0076 389 ProSiteProfiles PPM-type phosphatase domain profile. 46 357 IPR001932 -
Ssu7g0076 389 Pfam Protein phosphatase 2C 74 328 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0076 Ssu-Chr7 1417331 1421811 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0076 3 378 PP2C-type Phosphatase Gene Family AT3G12620 73.740 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0076 K01102 - gmx:100785413 669.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0076 7 1417331 1421811 Ssu7g0076 7 1417331 1421811 ECH