Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0058 atggaCCGCAGAGACTACCACCATCGTCCCGGTCATTTGGCACATGCTTCTCCTCCTGATTACTTTGTCCGCCTGGAGAATAACAATTACAAAGACGATCTATATTTGAGGAAGAGGACAAGGATGCGTCGGTGGCTTTGTTGCACTTGTCAGGTGGAAGAGTCTTACCCATCAAACGAAAATGAACACCTGAAAAGCCCAAGAAATTATGGAGATGGCAATCAAAAAGGCTCAAAGGTGTCAGTTCCTGTCAAGCCTGAAACACAAAAGGCACCACCACCCATTGAAGCTCCAGCATTATCTTTAGATGAGCTGAAGGAAAAGACTGACAACTTTGGTTCAAAGGCATTAATTGGTGAAGGATCGTATGGAAGGGTGTATTACGCAACCTTAAACAATGGCAAAGCAGTGGCTGTGAAAAAGCTTGATGTTTCATCTGAACCAGAAACAAATAATGAGTTTTTGACCCAGGTTTCCATGGTCTCAAGattgaagaatgaaaattttgttgagtTGCACGGTTACTGTGTTGAAGGAAATCTTCGTGTACTTGCGTATGAGTTTGCTACTATGGGTTCTCTTCATGACATATTGCATGGTAGAAAGGGAGTTCAAGGGGCACAACCAGGGCCAACTCTTGATTGGATACAGCGAGTTAGAATCGCAGTTGATGCAGCAAGGGGATTGGAATATTTACATGAGAAAGTTCAACCACCAATTATACACAGAGATATCAGATCAAGTAATGTGCTAATCTTTGAAGATTACAAGGCTAAGATAGCTGACTTTAACCTTTCCAATCAGGCCCCTGACATGGCTGCACGCCTTCATTCAACTCGTGTATTGGGAACTTTTGGGTATCATGCTCCAGAGTAA 876 0.4189 MDRRDYHHRPGHLAHASPPDYFVRLENNNYKDDLYLRKRTRMRRWLCCTCQVEESYPSNENEHLKSPRNYGDGNQKGSKVSVPVKPETQKAPPPIEAPALSLDELKEKTDNFGSKALIGEGSYGRVYYATLNNGKAVAVKKLDVSSEPETNNEFLTQVSMVSRLKNENFVELHGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPTLDWIQRVRIAVDAARGLEYLHEKVQPPIIHRDIRSSNVLIFEDYKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPE 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0058 291 ProSitePatterns Tyrosine protein kinases specific active-site signature. 240 252 IPR008266 GO:0004672|GO:0006468
Ssu7g0058 291 ProSiteProfiles Protein kinase domain profile. 112 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0058 291 SMART tyrkin_6 112 291 IPR020635 GO:0004713|GO:0006468
Ssu7g0058 291 Pfam Protein tyrosine and serine/threonine kinase 117 291 IPR001245 GO:0004672|GO:0006468
Ssu7g0058 291 SUPERFAMILY Protein kinase-like (PK-like) 92 291 IPR011009 -
Ssu7g0058 291 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 28 291 - -
Ssu7g0058 291 PANTHER PTI1-LIKE TYROSINE-PROTEIN KINASE 3 ISOFORM X2 28 291 - -
Ssu7g0058 291 MobiDBLite consensus disorder prediction 57 95 - -
Ssu7g0058 291 Gene3D Transferase(Phosphotransferase) domain 1 190 291 - -
Ssu7g0058 291 Gene3D Phosphorylase Kinase; domain 1 78 188 - -
Ssu7g0058 291 ProSitePatterns Protein kinases ATP-binding region signature. 118 141 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0058 Ssu-Chr7 861322 863990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0058 46 291 Receptor kinase-like Gene Family AT4G02010 43.145 1.41e-53 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Ssu7g0058 PK_Tyr_Ser-Thr 9.2e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0058 K13436 - mnt:21407434 523.087