Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0036 ATGAGAGGTTCGCGCAGAGGCAATGGCGATGATGCCGAGGAGAATGTGAAGAGGAAAGGGGTGAGCGAGCAGAACCCCGCCACTCGCAGGATCATACGCTCCCAGTTCCTCAAACTCAAGACTCTCATCAATGAGAAAAGAGACGATTTGATGAGCACGGAGTCCGATAAGTTCGACACCATCTTGGATGAGTTCGACAAGTTACACGACCAAGTTGAGAAGCCGAGAGAGCAGGTTGCAGATGCAGAGGCACTCTTGGATCTCACGCGCACTCTGGTGGGATCTGTTAGGTCTTTGGCCAACGAGGGTGTGACCCCTTCtcaatttgtttcctctttgcTCATACACTATGGCCATGGCCAAGGCCAAGATTCAATCAACTGGCAGAAACTTGGCCTTGCTGTGTCCCCAATATTCCTCTCCGTTCATGGCTCTTCTACCATGCTTGGTCCCATGGACAATGAATTCAAGCAGCGCAAAACAGGAATGCGCAGAAACCGTGCTTCTCGCCCAACTGCAACTACTAGGCCTCAACAGCTTGATGAGGCTGTGACAGAGGAAAAAACTGATACCGACAAAAACATGGCGACTATGTTTGACATCTTAAGGAGGACAAAGCGTGTTCGActtgaacacctaattttgaaCAGGACGTCTTTTGCTCAGACTCTGGAAAACTTGTTTGCCCTGTCATTCCTGGTGAAAGATGGCCGTGCTGAGATCAGTCTGGATGAAAATTGCTCACACTATGTTTCACCTAAAAATGCTCCAGCTGCCAACTTAGTATCATCAAAAGAAGTTTCTTACACTCATTTTGTATTCAGATATGACTACCAAGATTGGAAGTGTTTACAGATGATGAAGGATATTGTTCCTAGTGGCAAAGAATTAATGCCAGATAGGATTCAATGTTGCACTGCTGTTGGCTCTCAGGAAGAGATCGGTGGTGACACTTCCCAACCTGCTCTCGTTGTAACACCTATCAGGAAGCTATCACGGAACCGGGGACTGGTTGTGCAGGAGGAAggtgttgtagaagaatctccTGATTGCGATGAGGAAAATGCTTCCAGAGCAGGGGCTATCCGTCGGTGTAAGCGTAAGCTTCATTAA 1113 0.4555 MRGSRRGNGDDAEENVKRKGVSEQNPATRRIIRSQFLKLKTLINEKRDDLMSTESDKFDTILDEFDKLHDQVEKPREQVADAEALLDLTRTLVGSVRSLANEGVTPSQFVSSLLIHYGHGQGQDSINWQKLGLAVSPIFLSVHGSSTMLGPMDNEFKQRKTGMRRNRASRPTATTRPQQLDEAVTEEKTDTDKNMATMFDILRRTKRVRLEHLILNRTSFAQTLENLFALSFLVKDGRAEISLDENCSHYVSPKNAPAANLVSSKEVSYTHFVFRYDYQDWKCLQMMKDIVPSGKELMPDRIQCCTAVGSQEEIGGDTSQPALVVTPIRKLSRNRGLVVQEEGVVEESPDCDEENASRAGAIRRCKRKLH 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0036 370 MobiDBLite consensus disorder prediction 1 24 - -
Ssu7g0036 370 MobiDBLite consensus disorder prediction 1 27 - -
Ssu7g0036 370 Pfam Nse4 C-terminal 208 286 IPR014854 -
Ssu7g0036 370 MobiDBLite consensus disorder prediction 159 181 - -
Ssu7g0036 370 PANTHER UNCHARACTERIZED 13 369 IPR027786 GO:0005634|GO:0006281|GO:0030915
Ssu7g0036 370 PANTHER NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 4 13 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0036 Ssu-Chr7 626216 628431 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0036 29 369 Non-SMC Element family AT1G51130 51.705 5.24e-117 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0036 K22825 - gmx:100792117 590.112