Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0011 ATGGGCATGTCACCAAGAAACAACAATGTTGATAGAGGGGAAAGCGAAAAAGAGGAGCTGGCGCTGGTTTTGGAAGAAGTGGATGCTTTTCTCTACACCGCAGGAGGTAGTGATGGGGAGGATGTTCCAAATTGCATTTGTGTGCTACCCAAATTGTTGGAATGTATGGTGGATAGATACAACAAAGGTAGAAGAAGGTTTGGGGAGAAGGCAATAGATGACAAATCCTTCCTAGATGTCGTGGATCGCATCTATAAGCTCTCCACCTGTTATAGCATTGCCTTGGACGAAACTAGCTCTGTCCTAGAAAAAGCAATGTCCCTACTAGAAAAAGATCTTTGTTCTCTCTTGGAAGACCCCAAAACACCCAAGAAATCATTGTCCTTTGGTTATTTTCCTGATCTGTGTGCCACTCTTGAGAGCAAGTTCCCTACACCATCAGAACAAGATCAGGATCGTCAGGACTTTCCTGCTAATTTCTCTACACAAAAGATTTCCATTTTGAACAAGATCGCAACTACCATGATAAATGTCGGTTATCAGACCGAGTGTTGCATGGCTTTTGCCAATTTTCGACGAAGTGCTTTCAAAACTACACTGCAAAGATTTGGATATGGGAGTATGAGAATAGAAGATGTGTGTAAAATGTCATGGGAATCATTGGAAGGAGAAATTGCAACATGGAACCAAGTAGTTCGGCATTGCACCACTGTGCTCTTCAACGTTGAACAAAGGCTTTATGACTCTGTCTTCCCTAATCAACCCTCTATATCTCAAAACCTATTCAACGATCTTGCACGGCATGTCATCATTCATTTACTCAACTTTGCACAAGGTGCTGTTTTAACAAAATGGTCGACAGAGAAACTATTCAAATTCCTAGATATGTATGAGACCTTGAGGGAAAACATTATGAAGGATTTTTATATGGAGTCGTGTGTAAAGGAGCTAGCCTATGAGATAGCCACAACAAAGAATAGGCTAGTAGAAGCTATTGTGGCCACGTTTTGTGATTTGAAAAACTCCATCAAGAATGATAACGAAAGGATTCCTGTCCCTAACGGTGTAGTTCACCCCTTGACTCGTTATGTTATGAACTATCTTAAATATGCATACGAGTATAAAGATACCTTGGAGCAAGTGTTTGAGCAAGGTCAAGGTTTTAAGGGGATTGAGATTCATAATCATAAATACAACCAAGAAATGGAAGATGTAGGGACACCTAAGAATTCACCTTTTGCGCTTCAATTGATGACCATTATGGACCTTTTGGATGCAAATGTTGAAAGGAAATCAAGCTTGTATAAGGATCTTGCTTTGAGTTATGTTTTTCTAATGAACAATGGAAGATACATAGTGCAGAAGGTCAAAGGGTGTAAGGAGCTTCATGAATTGATGGGTGACAACTGGTGTAGAAGGAGGCAATCAGGTTTGAGGTTGTACCACAAGTGTTATCAAAGGGAAACTTGGAGTAAGGTGTTACAGTGCCTTAAGCCAGAAGGTCTGCAAGGGACTGGGAACAAGGTGTCTAAACAACTTGTCAGGGAAAGGTTTAAATGCTTCAACACCATGTTTGAAGAGATACACAAGGCCCAAAGTACTTGGATGGTGATTGATGAGCAACTCCAATCTGAACTTAGAGTTTCAATATCAAATTTGGTGATCCCAGCTTACCGTTCGTTTGTTGGAAGATTCAAACAACATATAGAATCAAGTAGACATATTGACAAGTATATCAAATATCATCCTGAAGATATTGAGCTTTTGATTGATAATTTGTTCGATGGTAATGCTATGTCCATGGTTCGAAAGAGGACATGA 1821 0.4009 MGMSPRNNNVDRGESEKEELALVLEEVDAFLYTAGGSDGEDVPNCICVLPKLLECMVDRYNKGRRRFGEKAIDDKSFLDVVDRIYKLSTCYSIALDETSSVLEKAMSLLEKDLCSLLEDPKTPKKSLSFGYFPDLCATLESKFPTPSEQDQDRQDFPANFSTQKISILNKIATTMINVGYQTECCMAFANFRRSAFKTTLQRFGYGSMRIEDVCKMSWESLEGEIATWNQVVRHCTTVLFNVEQRLYDSVFPNQPSISQNLFNDLARHVIIHLLNFAQGAVLTKWSTEKLFKFLDMYETLRENIMKDFYMESCVKELAYEIATTKNRLVEAIVATFCDLKNSIKNDNERIPVPNGVVHPLTRYVMNYLKYAYEYKDTLEQVFEQGQGFKGIEIHNHKYNQEMEDVGTPKNSPFALQLMTIMDLLDANVERKSSLYKDLALSYVFLMNNGRYIVQKVKGCKELHELMGDNWCRRRQSGLRLYHKCYQRETWSKVLQCLKPEGLQGTGNKVSKQLVRERFKCFNTMFEEIHKAQSTWMVIDEQLQSELRVSISNLVIPAYRSFVGRFKQHIESSRHIDKYIKYHPEDIELLIDNLFDGNAMSMVRKRT 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0011 606 Gene3D Exocyst complex component Exo70 64 604 - -
Ssu7g0011 606 PANTHER EXOCYST COMPLEX PROTEIN EXO70 16 597 IPR004140 GO:0000145|GO:0006887
Ssu7g0011 606 Pfam Exo70 exocyst complex subunit 227 591 IPR046364 GO:0000145|GO:0005546|GO:0006887
Ssu7g0011 606 SUPERFAMILY Cullin repeat-like 67 595 IPR016159 -
Ssu7g0011 606 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 16 597 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0011 Ssu-Chr7 137996 139816 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0011 20 605 EXO70 exocyst subunit family AT5G13150 48.046 2.72e-180 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0011 K07195 - gmx:100784339 917.531