Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3732 ATGAAAGGCGTTGAAGGAAAGGTGTGTGAGGAATTTTCTCCTAAGTATTATGGGCTTTGCTTCCTTGGAGGCATGCTTAGTTCGGGTACTACTCATCTTGCTATAACTCCTCTGGATGTCCTCAAAGTGAATATGCAGGTAAATCCGATTAAATATAATGGCATTTTGTCTGGCCTTGCCACCCTTTGGAAAGAAGAAGGACCTTATTCTCTTTGGAGAGGTTGGTCCGGCAAGTTCTTTGGATACGGTGTTCAAGGCGGGTTCAAATACGGTCTCTACGAGTACTTCAAGAAACTTTATTCCGATGTCTTGGTGGATTATAACAGGGATTTCATATTCTTTCTTAGCAGTTCATCTGCTCAGGTTTTAGCTGACGTGTCCCTTTCTCCTTTCGAAGCTGTTAAAATCCGTGTTCAGATCCAGCCTAATTTCGCAAAGGGTTTAGTTGATGGCTTTCCACGAGTATATAAAACTGAAGGTCTTGCTGGTTTCTACCGAGGCCTTATTCCATTATGGAGCCGCAATCTTCCTTTCTCCATTGTTATGTTTTCGACATTTGAGCATTCGGTGGACCTAATATATAGGAATATCATTCATAGAAGAAAGGAGCATTGTTCTGCAGCACAACAACTTGGTGTGACATGCTTAGCAGCATATACTGCTGGTGCTGTTGGCACTGTAATTTCCAACCCTGCTGACAATGTTATGACCAGTCTTTATAATAAAAGGCTGAATCTGCAATGCAAGCTATCAAGAGCATTGGGTTGGTTAATTTGTTCACTAGAAGTCTTCCTGTTCGAATCGCTCTTCTAG 813 0.4194 MKGVEGKVCEEFSPKYYGLCFLGGMLSSGTTHLAITPLDVLKVNMQVNPIKYNGILSGLATLWKEEGPYSLWRGWSGKFFGYGVQGGFKYGLYEYFKKLYSDVLVDYNRDFIFFLSSSSAQVLADVSLSPFEAVKIRVQIQPNFAKGLVDGFPRVYKTEGLAGFYRGLIPLWSRNLPFSIVMFSTFEHSVDLIYRNIIHRRKEHCSAAQQLGVTCLAAYTAGAVGTVISNPADNVMTSLYNKRLNLQCKLSRALGWLICSLEVFLFESLF 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3732 270 ProSiteProfiles Solute carrier (Solcar) repeat profile. 15 99 IPR018108 -
Ssu6g3732 270 Pfam Mitochondrial carrier protein 114 195 IPR018108 -
Ssu6g3732 270 Pfam Mitochondrial carrier protein 19 101 IPR018108 -
Ssu6g3732 270 ProSiteProfiles Solute carrier (Solcar) repeat profile. 108 192 IPR018108 -
Ssu6g3732 270 PANTHER MITOCHONDRIAL PHOSPHATE CARRIER PROTEIN 1, MITOCHONDRIAL 5 253 - -
Ssu6g3732 270 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 5 253 IPR044677 GO:0005315|GO:1990547
Ssu6g3732 270 Gene3D Mitochondrial carrier domain 20 258 IPR023395 -
Ssu6g3732 270 SUPERFAMILY Mitochondrial carrier 16 244 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3732 Ssu-Chr6 81542847 81544983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g3732 1 257 Chloroplast and Mitochondria Gene Families AT2G17270 67.442 1.34e-128 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3732 K15102 - mnt:21396892 418.313