Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3710 atgaacaaaattcaGCCACATTGTGGACGTGACTTCATATGGATTTTCCTCTTTCTGGTTCTTCTACCGTGTTTGGTTGGTGGTGAGTGTACATGTGAAGAAGAAGACGAAGCCGGTGACAAGGGTTTGGCTCAGAAATACAAAATAGCAGCTCTTGTTTCGATTTTGTTTGCAAGTGCAGTGGGTGTTACCATTCCAATGCTTGGCAAAACTTTCCCTGCTTTGCATCCTGAAAAGGACTTCTTCTTCATCGTTAAGGCCTTTGCGGCTGGAGTTATATTGTCTACCGGTTTCATCCATGTATTGCCCGATGCTTTTGAAAAGTTAACATCTCCATGTCTCAGTGATCATCCGTGGGGTGATTTTCCCTTCACAGGATTTGTGGCAATGTTATCCGCTATTGGAACGCTTATGGTTGATTCTCTTGCAACagcatattttaaaaagtctagCCTTAGCGACAAGGAGGGAGTTGTTGACGAAGAAGAGCAGGGGGAGGTACATGAACATAATCTGCACCTTCATACCCATGCAACTCATGGTTCCATTCCTTCTCCTTCAACAGACCTCCTTCGACATCGTGTTATTTCTCaggtGTTGGAGTTAGGGATTGTGGTGCATTCTGTGATAATAGGGATCTCTCTGGGTGCATCTGAAAGTCCTAAAACGATAAAGCCTCTTATTGCTGCTTTAACTTTCCACCAATTTTTTGAAGGCATGGGGCTCGGTGGTTGCATCTCACAGGCAAAATTCAAGATCAGAGCAGTTATAATTATGGCATTATTCTTTTCATTGACAACACCAGTGGGAATTGCGATCGGTATGATAATTACTAGTGCTTACAAGGAGAACAGCCAACCTGCTCTCATCGTGGAAGGTATTCTTAACGCAGCTTCGGCCGGGATCTTAATTTACATGTCTCTTGTGGACCTCCTTGCGGCTGATCTAATGAATCCCAAACTCCAAGGAAGTGGTAGGCTTCAGATGGGAGTTAATGTATCTCTGCTTCTTGGGGCTGGTTGTATGTCACTTCTAGCCAAATGGGCCTAA 1050 0.4295 MNKIQPHCGRDFIWIFLFLVLLPCLVGGECTCEEEDEAGDKGLAQKYKIAALVSILFASAVGVTIPMLGKTFPALHPEKDFFFIVKAFAAGVILSTGFIHVLPDAFEKLTSPCLSDHPWGDFPFTGFVAMLSAIGTLMVDSLATAYFKKSSLSDKEGVVDEEEQGEVHEHNLHLHTHATHGSIPSPSTDLLRHRVISQVLELGIVVHSVIIGISLGASESPKTIKPLIAALTFHQFFEGMGLGGCISQAKFKIRAVIIMALFFSLTTPVGIAIGMIITSAYKENSQPALIVEGILNAASAGILIYMSLVDLLAADLMNPKLQGSGRLQMGVNVSLLLGAGCMSLLAKWA 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3710 349 Pfam ZIP Zinc transporter 47 346 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Ssu6g3710 349 PANTHER ZINC TRANSPORTER 1 18 349 - -
Ssu6g3710 349 TIGRFAM zip: ZIP zinc/iron transport family 30 349 IPR004698 GO:0005385|GO:0016021|GO:0071577
Ssu6g3710 349 PANTHER ZINC/IRON TRANSPORTER 18 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3710 Ssu-Chr6 81152924 81155670 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g3710 13 349 Inorganic Solute Cotransporters AT3G12750 56.936 6.17e-134 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3710 K14709 - qsu:112037227 480.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1951 9 57324171 57330192 Ssu6g3710 6 81152924 81155670 PCT