Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3683 ATGTTTGATTGCTCTAGCATCATAATGAAGAAAATTCTTGAGACCTATAATGGCTTTGAGGGTGTTGGATCTGTGGTTGATGTTGGCGGTCGGACAGGAGCTACTACTAACATGATTGCCTCTAAGTATCCCACCACAAAGTGCATTAATTTTGACTTACCGCACGTGATTAAAGAAGGTGCTTTCCCTACATGA 195 0.4154 MFDCSSIIMKKILETYNGFEGVGSVVDVGGRTGATTNMIASKYPTTKCINFDLPHVIKEGAFPT 64
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3683 64 Pfam O-methyltransferase domain 3 59 IPR001077 GO:0008171
Ssu6g3683 64 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 58 IPR029063 -
Ssu6g3683 64 Gene3D Vaccinia Virus protein VP39 5 60 IPR029063 -
Ssu6g3683 64 PANTHER O-METHYLTRANSFERASE 1 60 IPR016461 GO:0008168
Ssu6g3683 64 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 64 IPR016461 GO:0008168
Ssu6g3683 64 PANTHER CAFFEIC ACID 3-O-METHYLTRANSFERASE-LIKE 1 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3683 Ssu-Chr6 80938161 80938355 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g3683 1 60 Monolignol Biosynthesis Gene Families AT5G54160 66.667 6.30e-21 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3683 K13066 K05279 nnu:104585771 89.3521