Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3607 ATGGACAATGCCGCATCTTCATCACTCTCCAAAGAACCCTCCGAAGAGGAATTCTGCCTCGCCCTCCGCAACGGTCTCATTCTCTGCAACGTCCTCAACAGAGTCAACCCCGGCGCTGTCGTCAAGGTTGTCGACAATGCGGTGGTCGACAACCTCGCCGTTCAGTCTGCAGAGGGACCAGCTCAGTCCGCAATTCAGTATTTCGAGAACATGCGAAACTTTCTTGAGGCCGTCAAAGACATGAAGCTTCTGACCTTCGAAGCTTCCGATTTGGAAAAGGGGGGTTCGTCGTGCAAAGTTGTGGACTGCATTCTCTGTTTGAAAGGTTATCATGAGTGGAAGCTATCGGGTGGAGTTGGGGTGTGGAGGTACGGTGGAACTGTGAGGATTACTTCCTTCCCCAAATGGTCTCCTTCCAACATAGTGGGTAGTGAAAATGCTGATGAGTCTCTGGATGAGTCTGAGTCATCACAGTATGAACAACTGCTTCAGCTTCTTCGTGTATCTGGAGAGGTTTCAGTTGAAGAAGCTGCGACTGCTAATGCTCTGGCCTCCCTTTTTGATCAGTTTGGACTCAAACTTCTCCTGGCTTACCTCAGAGAGGCTGATGGGGTTGAAGATCTGCCGCTGAATGCAATGGTGATTGATGCTTTGCTCAGGAAGGTTGTCAAGGATTTTTCTGCGTTGCTAGATTCTCTAGGCACTCAGCTTGGACTTCTCCTCAAGAAAGTATTGAAAGGCGATAATGGTTGCCTCTCTAAGAGAGAATTCATAGAAGCTATCACATTATATCTTAATCAAAGACGTTTGGCATCAAATGAATTCTCTAAACCATGCACTTGTGGTGGCAAACGCGATAGTAATCAGCTCAGTGTCAATTATTCTGCCAAGCATGCTGAAATAATTGATACTCAGCAAAAACAACTTGAGCAACTGAAGTACTTCTATGAAGAGATAAAATTGGAGGTCAAACAAATTCAATCTAAGTGGGATCAAGAATTGAGGAGGCTTGAGAATCATATAAAGAGCCTTGAAGAGGTCTCCTCTTCCTACCACAAAGTTTTGGAGGAGAATCGCTTTCTTTACAATCAAGTACAAGACCTCAAAGGAGCCATTAGGGTCTACTGTAGAGTGAGGCCCTTCTTACCAGGACAATCAAATGGACAATCTACAGTAGATTATATAGGAGAAAATGGAAACATAATGATTATGAATCCCCTTAAGCAAGGAAAAGATGCTAGAAGGgtattttcattcaataagGTGTTTGCAACAAGTGCCACCcaagAACAAATATATGCCGACACTCAACCATTGGTTAGGTCCGTCTTAGATGGCTATAATGTATGCATCTTTGCATATGGACAAACTGGGTCAGGAAAGACCTACACAATGAGTGGCCCTGATCTGATGACTGAAGAGACGTGGGGTGTAAACTATAGGGCTTTGCGTGacttatttcatatttcaaagGAAAGAGCAGATGCCATAAAATATGAAGTTGGCGTCCAGAtgatagaaatatataatgaaCAAGTGAGAGATTTATTAGTCAGTGATGGCTCTAACAGAAGATATCCTTCAAGGGTTCAAGCCTATACTTCTATTTGTATTGCATTATATACATTGGATATACGAAACAACTCTCAATTGAATGGACTTAATGTGCCTGATGCATCTTTAATCCCGGTTAATTGTACTCAAGATGTTCTTGTTTTAATGAGAATTGGTCAGAAGAATCGTGCTGTTGGTGCTACAGCTCTAAATGAGCGAAGCAGCCGTTCTCATAGTGTGTTGACAGTTCATGTGAGAGGGAGGGACTTAGTGTCTAACTCCATTCTTAAAGGTTGTCTCCATCTTGTGGATTTGGCTGGAAGTGAGAGGGTGGACAAATCTGAGGCTGTTGGTGAGAGACTAAAGGAGGCCCAGCATATAAATAAATCTCTTTCTGCACTTGGAGATGTTATCTCTGCTCTGGCACAGAAGAGTCCACATATTCCTTATAGAAATAGCAAGCTCACACAAGTTCTACAAGATTCATTAGGTGGCCACGCCAAAACTTTGATGTTTGTTCATATAAATCCTGAACTCAATGCTCTTGGAGAGACAATTAGCACACTTAAGTTTGCAGAGAGGGTTGCATCCATTGAACTTGGGGCTGCTCAATCTAATAAAGAAACTGCCGAAATCCGGGAGCTAAAGGAAGAGatatcaaatatcaaatcaGCATTGGAGAGGAAGGAAACTGAACTACAGCAATGGAAAGCTGGGAATGCACGAAGTGCCATAGAATCTCAGAAAGTACCAAGAGCTGTTTCACCTTTCCGTTTGCCCAAAAATGGTACCAGTGACAGCATGAAGCCTGAAAATTGTCAAAGACCCATGGATGATAGAAGCTCCGAGgCTAAAACTTGTTCTTCGGGTAAGCAAAGAAGGTCAAGATTTCCCTCAACATTTATAGAGAAGGACTCTATGCCAAAAATGTCTCTTCTGGCTGAAGAAAAGTTAGTGAGCTCAGGGACAGGTAGATCACCATCACCTCCAGTCAGGAGGAGATCAATATCCACCGATAGAGGGTCAGTTATTAAAAGCAAGGTCAAAAGTGACACATCAGACAACCAACCAATCTTAAAGCATCCATTTCCAACTAGAGTACTAGTAAATAAATCTCTTGTCACAATGCCAATGGCCTCATCTACAGACAATAACTCAAGGGTGAATCTGCATTCACAGGAGCCAGTGAAGCAGGATAACACTTCCGAAACTCTCTTCAGCCTCCAGAAGGTAAACGCCAGGAAAGTTAATCAAGAACATGAAGAGGAACAATTCAAGCAAGCTCTTGGTGCAGTAAGACAAGGTGGTACTAGGAAAAACAAGGCTGACAGTAAGGCCAAGGTTAAGCATCATCAACAATTGCCCTTTAGGATTCAAAAGGCTGATATGATACCTATTTCTGACATGGAGATTGGCCGTGAAATGACCATGGAGGCACCTCGAAAGAGCCATTACTGTGAGCCAGAAAATGATATAAATCTCATGGAGTCTGCTGTCAATGGTGTTGTAAATCTTAAAAAGATACATCAGAACATCTCTAGGAATTCTCAGAACATTGGATCAAGAGGAATAGTGCAAGCAGCAGAGCCTTTATTGTCCAGCaaagttgaaaacaaaattttacatgGTTCAGGTCGTAATCTTAAGGAAGGCACCAATACTACGTTGCCTGAAATTAGGAGGAGCCGATCTACGCCACGTGgaaagttttttgttttatcctgA 3279 0.4181 MDNAASSSLSKEPSEEEFCLALRNGLILCNVLNRVNPGAVVKVVDNAVVDNLAVQSAEGPAQSAIQYFENMRNFLEAVKDMKLLTFEASDLEKGGSSCKVVDCILCLKGYHEWKLSGGVGVWRYGGTVRITSFPKWSPSNIVGSENADESLDESESSQYEQLLQLLRVSGEVSVEEAATANALASLFDQFGLKLLLAYLREADGVEDLPLNAMVIDALLRKVVKDFSALLDSLGTQLGLLLKKVLKGDNGCLSKREFIEAITLYLNQRRLASNEFSKPCTCGGKRDSNQLSVNYSAKHAEIIDTQQKQLEQLKYFYEEIKLEVKQIQSKWDQELRRLENHIKSLEEVSSSYHKVLEENRFLYNQVQDLKGAIRVYCRVRPFLPGQSNGQSTVDYIGENGNIMIMNPLKQGKDARRVFSFNKVFATSATQEQIYADTQPLVRSVLDGYNVCIFAYGQTGSGKTYTMSGPDLMTEETWGVNYRALRDLFHISKERADAIKYEVGVQMIEIYNEQVRDLLVSDGSNRRYPSRVQAYTSICIALYTLDIRNNSQLNGLNVPDASLIPVNCTQDVLVLMRIGQKNRAVGATALNERSSRSHSVLTVHVRGRDLVSNSILKGCLHLVDLAGSERVDKSEAVGERLKEAQHINKSLSALGDVISALAQKSPHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPELNALGETISTLKFAERVASIELGAAQSNKETAEIRELKEEISNIKSALERKETELQQWKAGNARSAIESQKVPRAVSPFRLPKNGTSDSMKPENCQRPMDDRSSEAKTCSSGKQRRSRFPSTFIEKDSMPKMSLLAEEKLVSSGTGRSPSPPVRRRSISTDRGSVIKSKVKSDTSDNQPILKHPFPTRVLVNKSLVTMPMASSTDNNSRVNLHSQEPVKQDNTSETLFSLQKVNARKVNQEHEEEQFKQALGAVRQGGTRKNKADSKAKVKHHQQLPFRIQKADMIPISDMEIGREMTMEAPRKSHYCEPENDINLMESAVNGVVNLKKIHQNISRNSQNIGSRGIVQAAEPLLSSKVENKILHGSGRNLKEGTNTTLPEIRRSRSTPRGKFFVLS 1092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3607 1092 PANTHER KINESIN-LIKE PROTEIN KLP-3 1 1087 - -
Ssu6g3607 1092 Gene3D Kinesin motor domain 313 718 IPR036961 -
Ssu6g3607 1092 Coils Coil 926 946 - -
Ssu6g3607 1092 Coils Coil 723 757 - -
Ssu6g3607 1092 Coils Coil 327 347 - -
Ssu6g3607 1092 SMART kinesin_4 369 724 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu6g3607 1092 MobiDBLite consensus disorder prediction 790 808 - -
Ssu6g3607 1092 MobiDBLite consensus disorder prediction 951 970 - -
Ssu6g3607 1092 MobiDBLite consensus disorder prediction 839 853 - -
Ssu6g3607 1092 ProSiteProfiles Calponin homology (CH) domain profile. 1 112 IPR001715 GO:0005515
Ssu6g3607 1092 MobiDBLite consensus disorder prediction 773 877 - -
Ssu6g3607 1092 ProSiteProfiles Kinesin motor domain profile. 371 716 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu6g3607 1092 Pfam Calponin homology (CH) domain 15 112 IPR001715 GO:0005515
Ssu6g3607 1092 PANTHER HEAVY CHAIN, PUTATIVE-RELATED 1 1087 - -
Ssu6g3607 1092 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 372 753 IPR027417 -
Ssu6g3607 1092 Gene3D - 1 112 IPR036872 -
Ssu6g3607 1092 PRINTS Kinesin heavy chain signature 617 635 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu6g3607 1092 PRINTS Kinesin heavy chain signature 586 603 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu6g3607 1092 PRINTS Kinesin heavy chain signature 666 687 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu6g3607 1092 PRINTS Kinesin heavy chain signature 446 467 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu6g3607 1092 Pfam Kinesin motor domain 377 716 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu6g3607 1092 SUPERFAMILY Calponin-homology domain, CH-domain 12 132 IPR036872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3607 Ssu-Chr6 79733410 79739564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g3607 362 716 Calmodulin-binding Proteins AT5G65930 41.944 1.85e-75 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3607 K10406 - gmx:100811516 1840.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g3607 6 79733410 79739564 Ssu6g3607 6 79733410 79739564 ECH
Ssu9g1121 9 42905829 42908091 Ssu6g3607 6 79733410 79739564 PCT