Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu6g3604 | ATGTATAGGATTGCCCCCTCTACAATCCCAAAACAGATCACCACTTCTCTTCTCTCAGCAATGTCTGTAAGCTTAAGGAATCTGTCACTTTCTCCCAAAATCTTCTGCCTCACCTTTCTTCTCTTATTAAACTCTCTTTTGTTTCCATGCTGTTACTCCCTTAATGAGCAAGGCCAAGCTCTTTTAGCATGGAAGAACAGTTTAAACAGTACTGCGGATGCATTAGCATCTTGGAATCCTTCCAACCCAACCCCATGCAATTGGTTTGGCGTGCGCTGCAACTTACAAGGAGAGGTGGTTGAGATAAACTTGAAGTCAGTGAACTTGCAAGGCTCATtaccttcaaattttcaacctCTCAGGTCCTTGAAGACTCTTGTCCTCTCATCAACAAACATCACAGGCTGGATTCCAAAGGAAATTGGAGATTATAAAGAGCTCATTGTCATTGATCTCAGTGGCAATTTTCTCTTGGGTGAAATCCCTGAAGAAATTTGCAGACTAAGCAAACTTCAGACTTTAGCTCTGCAAACCAACTTTCTTGAAGGCAACATTCCATCCAACATAGGAAATTTATCAAGTCTTGTGAACTTGACACTCTATGACAACAAACTGAGTGGTGAAATTCCAAAGAGTATTGGCTCCTTAACCGAGCTCCAAGTGTTGAGAGCAGGAGGGAACACAAACCTTAAGGGTGAGGTGCCATGGGACATTGGAAACTGCACCAACTTGGTGGTTTTAGGCCTTGCAGAAACCAGCATTTCCGGGAGTCTTCCTTCTTCAATAGGGATGCTGAAAAGCATTCAGACCATAGCCATTTACACTACTCTTCTGTCAGGCTCTATCCCAGAAGAGATAGGGAAGTGCAGTGAGTTGCAGAACCTGTACTTGTATCAGAACTCAATCTCTGGTTCCATCCCAAGTCAAATCGGAGAGCTCAGCAAGCTTCAGAATCTTCTCTTATGGCAAAACAATATAGTTGGTACAATCCCAGAAGAGCTTGGAAGCTGCACTCAACTTGAAGTCATAGACTTGTCAGAAAATCTTCTCACAGGTAGCATACCAACCAGTTTTGGTAAGCTATCAAATCTGCAAGGGCTTCAACTGAGTGTTAATAAGCTTTCAGGCATTATACCTCCTGAAATCACAAATTGCACTTCTCTGACTCAACTGGAAGTTGACAACAATGCTATTTCTGGGGAGATTCCTCCTCTTATTGGCAACTTGAGAAGCTTGACTCTCTTCTTTGCATGGCAGAACAAGCTCACAGGAAAAATCCCAGATAGTCTTTCTCAGTGCCAAGACCTTCAGGCACTTGATCTCTCTTACAACAATTTAACTGGTCCAATACCCAAACAACTTTTTGGGCTGAGGAACCTCACTAAACTGCTGCTACTTTCCAATGATTTGTCAGGCTGTATACCACCTGAGATAAGTAAGTGCACAAGCCTCTACAGGTTGAGGCTAAATCACAATAGACTGGCAGGTACCATTCCATCTGAGATCACCAACTTGAAGAATTTAAACTTTTTGGATGTGAGCAGCAATCATCTTGTAGGGGAGATTCCTCCAACACTATCCAGATGCCAAAATCTTGAGTTTCTGGACCTCCACTCAAATAGCCTCACTGGTTCAGTTCCAGATAATCTGCCCAAAAACCTTCAGTTAATCGACCTCTCAGACAACAGGCTAACTGGTGAACTGAGTCATTCCATTGGTTCATTAACTGAATTAACCAAACTCAACTTGGGAAAGAATCAGCTCAGTGGAAGCATCCCAGCAGAGATCCTATCTTGCTCCAAGTTACAACTTCTGGACCTGGGAAGCAATAGTTTCTCTGGAGAAATTCCCAAGGAAGTTGCTCAAATTCCTTCACTAGAAATCTTTCTCAATCTTAGTTGTAACCAGTTTTCTGGTGAAATCCCACCCCAGTTCTCCAGTCTTAGAAAACTTGGAGTGCTTGACCTCTCCCACAACAAGCTTTCAGGGAACTTGGATGCTTTCTCTGACCTtcagaaccttgtttcattGAATGTTTCCTTCAATGACTTCTCTGGAGAATTGCCTAACACCCCATTCTTCCGGAAACTCCCTCTCAGTGATCTCACAGGAAATGATGGTCTCTACATTGTTGGTGGAGTGGTAACTCCAGCTGACAGAAAGGAAGCCAAGGGTCATGCCAGACTGGCTATGAAGATTATAGTGACCATTCTCCTAAGCACCAGTGCAGTACTAGTACTGCTCACAATCCATGTCTTGATCCGTGCTCATGTTGCTAACAAAGCACTCATGGAAAATAACAGTTGGGTGATGACTTTGTATCAGAAGTTTGAAGCCTCTATTGATGACATTGTCCGGAATTTGACATCATCCAATGTGATTGGCACTGGAAGCTCTGGAGTTGTGTACAAGGTCACAGTTCCAAATGGCCAAACACTAGCGGTTAAAAAGATGTGGTCATCGGCAGAGTCTGAAGCATTTACTTCTGAAATTCAAACACTGAGTTCAATTAGACACAAGAACATCATCAAGCTTCTGGGTTGGGGGTCCAGCAAGAACATGAAGCTGCTGTTTTATGACTACCTCCCTAATGGAAGCCTGAGCTCATTACTTCACGGTTCAGGAAAGGGAAAACCAGAATGGGAGACCAGATATGATGTTATGTTAGGAGTGGCTCATGCACTAGCATATTTGCACCATGATTGTGTGCCTTCCATATTGCATGGAGATGTCAAAGCCATAAATGTGTTGTTAGGTCCTGGCAACCAACCTTACCTTGCTGACTTTGGCCTAGCTAGAATTGCAAGTGAAAATGGTGATTATACTAATTCCAAGCCAGTTCAAAGACCCTACCTTGCTGGCTCGTATGGATACATGGCTCCAGAGCAAGCATCTATGCAGCGGATCACCGAGAAGAGTGATGTGTACAGTTTTGGTGTGGTCCTACTTGAGGTGCTGACAGGAAGGCACCCCCTAGACCCAACACTGCCTGGGGGTGCACACTTGGTTCAGTGGGTTTGGAACAATTTAGCTAGCAAAGGAGACCCATCTGACATTCTTGACCCAAAGCTGAGAGGTAGAACTGATTCTACTATGCATGAAATGCTACAAACTCTAGCCGTGTCATTTCTATGTGTCAGCACCCGTGCTGAGGACCGTCCAACAATGAAGGACACTGTTGCAATGCTCCAGGAAATTAGAACTGTTGAGGCCTCAAGCACAGGTCCTGATGTGTTAAAGGGAGTTTTAACAGTGCATACTCCTAAGAATGGTGTTCCACATGGAACTTCTAACTGTTCCTTTAATTTGTCAGAGGACTGA | 3321 | 0.4339 | MYRIAPSTIPKQITTSLLSAMSVSLRNLSLSPKIFCLTFLLLLNSLLFPCCYSLNEQGQALLAWKNSLNSTADALASWNPSNPTPCNWFGVRCNLQGEVVEINLKSVNLQGSLPSNFQPLRSLKTLVLSSTNITGWIPKEIGDYKELIVIDLSGNFLLGEIPEEICRLSKLQTLALQTNFLEGNIPSNIGNLSSLVNLTLYDNKLSGEIPKSIGSLTELQVLRAGGNTNLKGEVPWDIGNCTNLVVLGLAETSISGSLPSSIGMLKSIQTIAIYTTLLSGSIPEEIGKCSELQNLYLYQNSISGSIPSQIGELSKLQNLLLWQNNIVGTIPEELGSCTQLEVIDLSENLLTGSIPTSFGKLSNLQGLQLSVNKLSGIIPPEITNCTSLTQLEVDNNAISGEIPPLIGNLRSLTLFFAWQNKLTGKIPDSLSQCQDLQALDLSYNNLTGPIPKQLFGLRNLTKLLLLSNDLSGCIPPEISKCTSLYRLRLNHNRLAGTIPSEITNLKNLNFLDVSSNHLVGEIPPTLSRCQNLEFLDLHSNSLTGSVPDNLPKNLQLIDLSDNRLTGELSHSIGSLTELTKLNLGKNQLSGSIPAEILSCSKLQLLDLGSNSFSGEIPKEVAQIPSLEIFLNLSCNQFSGEIPPQFSSLRKLGVLDLSHNKLSGNLDAFSDLQNLVSLNVSFNDFSGELPNTPFFRKLPLSDLTGNDGLYIVGGVVTPADRKEAKGHARLAMKIIVTILLSTSAVLVLLTIHVLIRAHVANKALMENNSWVMTLYQKFEASIDDIVRNLTSSNVIGTGSSGVVYKVTVPNGQTLAVKKMWSSAESEAFTSEIQTLSSIRHKNIIKLLGWGSSKNMKLLFYDYLPNGSLSSLLHGSGKGKPEWETRYDVMLGVAHALAYLHHDCVPSILHGDVKAINVLLGPGNQPYLADFGLARIASENGDYTNSKPVQRPYLAGSYGYMAPEQASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAHLVQWVWNNLASKGDPSDILDPKLRGRTDSTMHEMLQTLAVSFLCVSTRAEDRPTMKDTVAMLQEIRTVEASSTGPDVLKGVLTVHTPKNGVPHGTSNCSFNLSED | 1106 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu6g3604 | 1106 | PANTHER | LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN | 22 | 1079 | - | - | |
Ssu6g3604 | 1106 | SUPERFAMILY | RNI-like | 306 | 679 | - | - | |
Ssu6g3604 | 1106 | PRINTS | Leucine-rich repeat signature | 648 | 661 | - | - | |
Ssu6g3604 | 1106 | PRINTS | Leucine-rich repeat signature | 436 | 449 | - | - | |
Ssu6g3604 | 1106 | Pfam | Protein kinase domain | 791 | 994 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu6g3604 | 1106 | SUPERFAMILY | Protein kinase-like (PK-like) | 775 | 1064 | IPR011009 | - | |
Ssu6g3604 | 1106 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 906 | 918 | IPR008271 | GO:0004672|GO:0006468 | |
Ssu6g3604 | 1106 | Gene3D | Phosphorylase Kinase; domain 1 | 753 | 861 | - | - | |
Ssu6g3604 | 1106 | ProSiteProfiles | Leucine-rich repeat profile. | 650 | 672 | IPR001611 | GO:0005515 | |
Ssu6g3604 | 1106 | SUPERFAMILY | L domain-like | 52 | 328 | - | - | |
Ssu6g3604 | 1106 | SMART | serkin_6 | 788 | 1036 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu6g3604 | 1106 | SMART | LRR_sd22_2 | 648 | 667 | - | - | |
Ssu6g3604 | 1106 | SMART | LRR_sd22_2 | 505 | 534 | - | - | |
Ssu6g3604 | 1106 | SMART | LRR_sd22_2 | 192 | 218 | - | - | |
Ssu6g3604 | 1106 | SMART | LRR_sd22_2 | 337 | 366 | - | - | |
Ssu6g3604 | 1106 | SMART | LRR_sd22_2 | 551 | 577 | - | - | |
Ssu6g3604 | 1106 | SMART | LRR_sd22_2 | 289 | 315 | - | - | |
Ssu6g3604 | 1106 | Pfam | Leucine rich repeat N-terminal domain | 55 | 94 | IPR013210 | - | |
Ssu6g3604 | 1106 | SMART | LRR_typ_2 | 457 | 481 | IPR003591 | - | |
Ssu6g3604 | 1106 | SMART | LRR_typ_2 | 361 | 385 | IPR003591 | - | |
Ssu6g3604 | 1106 | SMART | LRR_typ_2 | 530 | 553 | IPR003591 | - | |
Ssu6g3604 | 1106 | SMART | LRR_typ_2 | 505 | 529 | IPR003591 | - | |
Ssu6g3604 | 1106 | SMART | LRR_typ_2 | 575 | 599 | IPR003591 | - | |
Ssu6g3604 | 1106 | SMART | LRR_typ_2 | 313 | 337 | IPR003591 | - | |
Ssu6g3604 | 1106 | SMART | LRR_typ_2 | 648 | 670 | IPR003591 | - | |
Ssu6g3604 | 1106 | SMART | LRR_typ_2 | 192 | 216 | IPR003591 | - | |
Ssu6g3604 | 1106 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED | 22 | 1079 | - | - | |
Ssu6g3604 | 1106 | Gene3D | Ribonuclease Inhibitor | 211 | 452 | IPR032675 | - | |
Ssu6g3604 | 1106 | Gene3D | Ribonuclease Inhibitor | 54 | 210 | IPR032675 | - | |
Ssu6g3604 | 1106 | Gene3D | Ribonuclease Inhibitor | 550 | 628 | IPR032675 | - | |
Ssu6g3604 | 1106 | Gene3D | Ribonuclease Inhibitor | 453 | 549 | IPR032675 | - | |
Ssu6g3604 | 1106 | Gene3D | Transferase(Phosphotransferase) domain 1 | 862 | 1078 | - | - | |
Ssu6g3604 | 1106 | Pfam | Leucine Rich Repeat | 553 | 575 | IPR001611 | GO:0005515 | |
Ssu6g3604 | 1106 | Gene3D | Ribonuclease Inhibitor | 629 | 712 | IPR032675 | - | |
Ssu6g3604 | 1106 | ProSitePatterns | Protein kinases ATP-binding region signature. | 794 | 817 | IPR017441 | GO:0005524 | |
Ssu6g3604 | 1106 | Pfam | Leucine rich repeat | 339 | 398 | IPR001611 | GO:0005515 | |
Ssu6g3604 | 1106 | Pfam | Leucine rich repeat | 630 | 684 | IPR001611 | GO:0005515 | |
Ssu6g3604 | 1106 | ProSiteProfiles | Protein kinase domain profile. | 788 | 1066 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu6g3604 | Ssu-Chr6 | 79715300 | 79718721 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu6g3604 | 51 | 1106 | Receptor kinase-like Gene Family | AT5G56040 | 65.453 | 0.0 | 1379 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Ssu6g3604 | Pkinase | 2.7e-38 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu6g3604 | - | - | gmx:100813139 | 1944.09 |