Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3555 ATGGGTTTGGAGCTTCGTATTCCCTTATCTACAATCCTTCCTTTCTTCCTCTTAGTGTTCATGCTAATCAACATACTTTGGAGATCAAAAACCAAGAATTCAAACTCCAAGTTGCCACCAGGGCCAAGGAAGCTACCTCTCATAGGGAACATACACCACCTTGGAACGCTGCCTCATAGGTCCCTAGCAGGATTGGCAAGTAAATATGGTCCTCTCATGCATATGCAGCTTGGTGAGCTTTGCTGCATAGTGATATCTTCGCCCGAAATGGCTAAAGAGGTGATGAACACACATGATATCATCTTTGCAAATAGGCCTCGTGTGCTTGCTGCTGATGTTATCACTTATGGCTCTAAGGGCATGACCTTCAGCCCGCATGGAACTTATTGGAGGCAGATGAGAAAGATTTGCACCATGGAACTACTAGCGCCAAAGCGTGTTGACTCCTTCAGATCAATCAGGGAACAAGAGTTGTCAAATGTTGTCAAGGAGATATCTCTGAGTGAAGGGTCGCCTATTAATCTCAGTGAGAAGATTAAGTCATTGGCATATGGGTTAACATCACGGATTGCTTTCGGTAAAAAATCCGAAGACCAAAAGGCTTATATGGAACTTATGAAGGGTGTCATTGAGACAGTTGCAGGGTTCTCTGTTGCTGATCTGTATCCTTCCATTGGACTTCTTCAAGTTCTTACTGGGATTAGGAGTAAAGTAGAGAAGATCCATCGAGGAATGGATAGGATACTTGAGGACATTGTTAGGGATCACAGAGACAAAAATTTGGACACACAGGCTGTTGGTGAAGAAAATGGGGAAGATCTAGTTGATGTTCTTTTAAGGCTTCAGAAGAATGGTGGCCTCCAACACCCCCTATCTGACAGTGTAGTCAAAGCAACCATTTTGGACATTTTCAGTGCTGGAAGCGACACTTCTTCAACAATTATGGAGTGGGTAATGTCAGAACTGGTGAAAAACCCAAGGGTGATGGAGAAAGTGCAAATTGAGGTAAGAAGGGTCTTTGATGGAAAAGGATATGTGGATGAAACAAGTATTCATGAACTGAAATACTTGAGATCAGTTGTCAAAGAAACTTTGCGTTTACATCCACCTGCTCCATTACTGCTTCCAAGGGAATGCAGTGAGAGATGTGAGATTAATGGGTATGAGATACCAGCCAAGAGCAAGGTCATTGTTAATGCATGGGCAATTGGGAGGGATCCTAACTATTGGATTGAAGCTGAGAAGTTTTATCCTGAAAGGTTCCTTGATAACTCAGTTGATTACAAAGGTGCTGAGTTTGAGTTTATCCCATTTGGAGCTGGAAGGAGGATATGCCCGGGCATCAATCTTGGCATTGTTAACGTTGAATTCTCACTTGCAAATTTGCTTTTCCATTTTGATTGGAAGATGGCTGAAGGGAATAAGCCTGAGGAACTTGATATGACTGAATCCTTTGGCTTGGCTGTAAAGAGAAAACAGGATTTGGAGTTGATTCCTATCAGTTACCACTTACCTACCACTACAAGGCCGTAA 1533 0.4279 MGLELRIPLSTILPFFLLVFMLINILWRSKTKNSNSKLPPGPRKLPLIGNIHHLGTLPHRSLAGLASKYGPLMHMQLGELCCIVISSPEMAKEVMNTHDIIFANRPRVLAADVITYGSKGMTFSPHGTYWRQMRKICTMELLAPKRVDSFRSIREQELSNVVKEISLSEGSPINLSEKIKSLAYGLTSRIAFGKKSEDQKAYMELMKGVIETVAGFSVADLYPSIGLLQVLTGIRSKVEKIHRGMDRILEDIVRDHRDKNLDTQAVGEENGEDLVDVLLRLQKNGGLQHPLSDSVVKATILDIFSAGSDTSSTIMEWVMSELVKNPRVMEKVQIEVRRVFDGKGYVDETSIHELKYLRSVVKETLRLHPPAPLLLPRECSERCEINGYEIPAKSKVIVNAWAIGRDPNYWIEAEKFYPERFLDNSVDYKGAEFEFIPFGAGRRICPGINLGIVNVEFSLANLLFHFDWKMAEGNKPEELDMTESFGLAVKRKQDLELIPISYHLPTTTRP 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3555 510 SUPERFAMILY Cytochrome P450 39 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3555 510 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3555 510 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3555 510 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3555 510 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 8 503 - -
Ssu6g3555 510 Pfam Cytochrome P450 39 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3555 510 PANTHER CYTOCHROME P450 71B11-RELATED 8 503 - -
Ssu6g3555 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Ssu6g3555 510 Gene3D Cytochrome P450 30 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3555 510 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3555 510 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3555 510 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3555 510 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3555 510 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3555 510 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3555 510 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3555 510 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3555 Ssu-Chr6 79151688 79153648 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g3555 18 500 Cytochrome P450 AT5G25120 41.785 2.16e-139 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3555 - - gmx:100776770 889.026