Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3553 ATGCATATGCAGCTTGGTGAGCTTCGCTGCATAGTGATATCTTCGCCCGAAATGGCCAAAGAGGTGATGAACACACATGATATCATCTTTGCAAATAGGCCTCATGTGCTTGCTGCTGATGTTATCACTTATGGCTCTAAGGGCATGAGCTTCAGCCCGCATGGAACTTATTGGAGGCAGATGAGAAAGATTTGCACCATGGAACTACTAGCGCCAAAGCGTGTTGACTCCTTCAGATCAATCAGGGAACAAGAGTTGTCAAATGTTGTCAAGGAGATATCCCTGAGTGAAGGGTCACCTATTAATCTCAGTGAGAAGATTAATTCATTGGCCTATGGGTTAACATCACGGATTGCTTTTGGTAAAGAATCCAAAGACCAAAAGGCTTATATGGAACTGACGAAGGGTGTCATTGAGACAGTTGCAGGGTTCTCTGTTGCTGATCTGTATCCTTCCATTGGACTTCTTCAAGTTCTTACTGGGATTAGGAGTAAAGTAGAGAAGATCCATCGAGGAATGGATAGGATACTTGAGAACATTGTTAGGGATCACGGAGACAAAAATTTGGACACACAGGCTGTTGGTGAAGAAAATGGGGAAGATCTAGTTGATGTTCTTTTAAGGCTTCAGAAGAATGGTGGCCTCCAACACCCCCTATCTGACAGTGTTGTCAAAGCAACCATTTTGGACATTTTCAGTGCTGGAAGCGAGTCCTCTTCAACAACTATGGAGTGGGTAATGTCAGAACTGGTGAAAAACCCAAGGGTGATGGAGAAAGTGCAAATTGAGGTAAGAAGGGTCTTTGATGGAAAAGGATATGTGGATGAAACAAGTATTCATGAACTGAAATACTTGAGATCAGTTGTCAAAGAAACTTTGCGTTTACATCCACCTGCTCCATTACTGCTTCCAAGGGAATGCAGTGAGAGATGTGAGATTAATGGGTATGAGATACCAGCCAAGAGCAAGGTCATTGTTAATGCATGGGCAATTGGGAGGGATCCTAACTATTGGATTGAAGCCGAGAAATTTTATCCTGAAAGGTTCCTTGATAGCTCAGTTGATTACAAAGGTGCTGAGTTTGAGCTTATCCCATTTGGAGCTGGAAGGAGGATATGCCCGGGCATCAATCTTGCATTGTTAACGTTGAATTCTCACTTGCAAATTTGCTTTTCCATTTTGATTGGAAGATGGCTGAAGGGAATAGGCCTGAAGAACTTGATATGA 1227 0.4287 MHMQLGELRCIVISSPEMAKEVMNTHDIIFANRPHVLAADVITYGSKGMSFSPHGTYWRQMRKICTMELLAPKRVDSFRSIREQELSNVVKEISLSEGSPINLSEKINSLAYGLTSRIAFGKESKDQKAYMELTKGVIETVAGFSVADLYPSIGLLQVLTGIRSKVEKIHRGMDRILENIVRDHGDKNLDTQAVGEENGEDLVDVLLRLQKNGGLQHPLSDSVVKATILDIFSAGSESSSTTMEWVMSELVKNPRVMEKVQIEVRRVFDGKGYVDETSIHELKYLRSVVKETLRLHPPAPLLLPRECSERCEINGYEIPAKSKVIVNAWAIGRDPNYWIEAEKFYPERFLDSSVDYKGAEFELIPFGAGRRICPGINLALLTLNSHLQICFSILIGRWLKGIGLKNLI 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3553 408 Pfam Cytochrome P450 3 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3553 408 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 1 384 - -
Ssu6g3553 408 SUPERFAMILY Cytochrome P450 2 384 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3553 408 Gene3D Cytochrome P450 1 393 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3553 408 PANTHER CYTOCHROME P450 71B11-RELATED 1 384 - -
Ssu6g3553 408 PRINTS E-class P450 group I signature 363 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3553 408 PRINTS E-class P450 group I signature 243 269 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3553 408 PRINTS E-class P450 group I signature 223 240 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3553 408 PRINTS E-class P450 group I signature 286 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3553 408 PRINTS E-class P450 group I signature 18 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3553 408 PRINTS E-class P450 group I signature 327 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3553 408 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 366 375 IPR017972 GO:0005506|GO:0016705
Ssu6g3553 408 PRINTS P450 superfamily signature 287 298 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3553 408 PRINTS P450 superfamily signature 364 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3553 408 PRINTS P450 superfamily signature 234 251 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3553 408 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3553 Ssu-Chr6 79132119 79133923 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g3553 1 398 Cytochrome P450 AT3G48310 37.594 1.99e-103 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3553 - - gmx:100776770 663.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g3553 6 79132119 79133923 Ssu6g3553 6 79132119 79133923 ECH