Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3551 ATGGTTAAAACATCGAACCTTCCCCAAGGGCCATGGAAACTTCCTTTCATTGGAAGCATACACCACCTGATTGACTTTCTACCCCATCATCGCTTAAGAGAACCAGCCCAAAAATATGGCCCTCTCATGCACCTAAAACTTGGTGAAGTATCAACCATTGTGGTTTCTTCTCCGAAAGTTGCCGAGGAGGTGTTGAAAACCTATGATGCCATTTTTGCTCAAAGACCCCATCAAGTTGGTGCAGATATCATGTGTTATGGTTCCACAGATATTGCCACTGCACCATATGGAGTTATAGAATGGGCCATTTCAGAATTGATGAAAAACCCCACAGTAATGATCAAAGCTCAAGAAGAAGGTAGAAAAGTTTTTGGCAGCAAAGGATACACTGATGAAACAGCTcttgaagaactaaaatttcTGAAAGCGGTCATCAAAGAAACATTGAGATTACACCCTCCTTTTCGTTTTCTTCCAAGAGAATGTAGAGAAGCTTGTGAGATTGGAAGAGACTCTAAGTACTGGAGTGAAGCTGAGAAGTTTTATCCAGAGAGATTCATGAATTGTCCAATTGATTACAGGGGTTCCAATATTGAGTTTATACCCTTTGGTGCTGGAAGGAGAATATGTCCAGGCATTTTGTTTGGTATATCTAGTATTGAACTTTGTCTTGCACGActactttaa 687 0.3945 MVKTSNLPQGPWKLPFIGSIHHLIDFLPHHRLREPAQKYGPLMHLKLGEVSTIVVSSPKVAEEVLKTYDAIFAQRPHQVGADIMCYGSTDIATAPYGVIEWAISELMKNPTVMIKAQEEGRKVFGSKGYTDETALEELKFLKAVIKETLRLHPPFRFLPRECREACEIGRDSKYWSEAEKFYPERFMNCPIDYRGSNIEFIPFGAGRRICPGILFGISSIELCLARLL 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3551 228 Pfam Cytochrome P450 167 228 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3551 228 Pfam Cytochrome P450 8 83 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3551 228 Pfam Cytochrome P450 98 168 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3551 228 PANTHER CYTOCHROME P450 71B11-RELATED 98 228 - -
Ssu6g3551 228 Gene3D Cytochrome P450 2 96 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3551 228 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 98 228 - -
Ssu6g3551 228 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 2 97 - -
Ssu6g3551 228 PRINTS P450 superfamily signature 108 121 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3551 228 PRINTS P450 superfamily signature 143 154 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3551 228 PRINTS P450 superfamily signature 201 210 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3551 228 Gene3D Cytochrome P450 97 228 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3551 228 SUPERFAMILY Cytochrome P450 8 97 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3551 228 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 203 212 IPR017972 GO:0005506|GO:0016705
Ssu6g3551 228 PRINTS E-class P450 group I signature 210 228 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3551 228 PRINTS E-class P450 group I signature 164 188 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3551 228 PRINTS E-class P450 group I signature 200 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3551 228 PRINTS E-class P450 group I signature 47 73 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g3551 228 PANTHER CYTOCHROME P450 71B11-RELATED 2 97 - -
Ssu6g3551 228 SUPERFAMILY Cytochrome P450 98 228 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3551 Ssu-Chr6 79086987 79089055 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g3551 6 228 Cytochrome P450 AT3G26180 35.762 1.22e-42 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3551 - K23807 gmx:100779851 211.46