Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3462 ATGGAAGGTGTTGTTGTGAGAAGAGTCATTCCTTCGGATAACAGTTGTCTCTTCAATGCAGTTGGATTTGTTATGGATCATGACAAAAAGAAAGCTGCTGAGTTGAGACAGGTTATAGCTGCAACAGTAGCAAGTGATCCAGAGAAATATTGTGAAGCATTTCTTGGGAAGCCAAATGCAGAGTATTGTAACTGGATTCTTGACTCGGAGAAGTGGGGAGGTGCAATTGAACTTTCAATATTAGCAGATTATTATGGACGTGAAATTGCAGCATATGATATCCAGACTACCCGATGTGATTTGTATGGTCAGGGAAATAACTATTCTGAAAGAGTGATGCTGATTTATGATGGTCTCCACTATGATGCATTAGTGATGTCTCCCTTGGAGGGAGCTCCTGAGGAGTTTGATCAGACCATATTTGCTGTACGGAAAAACAGAAGCATTGGACCTGTTGAGGGCCTTGTTCTAAATTTTGTGAAGGACCAGCAGAGGAAACGGAGTTACACTGACACTGCCAGCTTCACTCTGCGCTGTGGAGTATGCCAAATTGGAGTAGTTGGTCAGAAGGAGGCAGTGGAGCATGCGCAAGCTACTGGTCATGTTAACTTCCAAGAGTATAGATGA 627 0.4306 MEGVVVRRVIPSDNSCLFNAVGFVMDHDKKKAAELRQVIAATVASDPEKYCEAFLGKPNAEYCNWILDSEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQGNNYSERVMLIYDGLHYDALVMSPLEGAPEEFDQTIFAVRKNRSIGPVEGLVLNFVKDQQRKRSYTDTASFTLRCGVCQIGVVGQKEAVEHAQATGHVNFQEYR 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3462 208 PANTHER UBIQUITIN THIOESTERASE OTU1 6 206 - -
Ssu6g3462 208 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 6 206 IPR039138 GO:0004843|GO:0016579|GO:0030433|GO:0101005
Ssu6g3462 208 ProSiteProfiles OTU domain profile. 5 127 IPR003323 -
Ssu6g3462 208 SUPERFAMILY Cysteine proteinases 8 125 IPR038765 -
Ssu6g3462 208 Pfam OTU-like cysteine protease 12 98 IPR003323 -
Ssu6g3462 208 Gene3D - 1 173 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g3462 1 208 C2H2 Transcription Factor Family AT1G50670 81.731 4.62e-130 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3462 K13719 - gmx:100499809 404.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g3462 6 77432178 77437395 Ssu6g3462 6 77432178 77437395 ECH