Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3415 ATGGAAAAGAAGCTCCAGCCTCGCTTCTCGCTCGGCCGGCAATCCTCCCTCGCGCCGGAGCGCGCCGGTGCCGGCGACTCGTTGGAGGCGCTGGACCCGACGGTCCGATTAATGTATCTGGCGAACGAAGGGGACTTGGACGGGATTAAGGAGCTGCTGGACGCAGGGAGTGACGTCAATTTCACCGACATTGACGGCCGCACCGCGCTCCACGTCGCCGCCTGTCAGGCCCGCACCGACGTCGTCGATTTGCTGCTCCGACGAGGCGCCCACGTCGATCCCCGAGACCGCTGGGGCAGCACCCCTCTAGCTGATGCAATGTACTACAAAAATCACGACATTGTGAAGCTTTTGGAGAAACACGGTGCAAAACCCCCGatGGCTCCCATGCATGTGCAGAATGCTCGTGAAGTCCCGGAGTATGAGATTGATCCTTCTGAGCTTGATTTTACTAATAGTGCTTGCATAACAAAGGGAACTTTTCGGAATGCATTATGGCGAGGAACTCAGGTTGCTGTTAAGACGCTTGGGGAGGAACTGTTCACTGATGATGATAAAGTAAAGGCATTTCATGATGAGCTTACATTACTTGAGAAAATAAGGCATCCAAATGTAGTCCAGTTTTTGGGTGCTGTAACACAAAGCACCCCAATGATGATTGTCACAGAATATCTACCCCAGGTTAGGGACCTTCATGCCTACTTGAAGCGGAAAGGTGCATTAAAACCAATAACAGCTGTAAAGTTTGCACTGGATATTGCTAGGGGTATGAACTATTTGCATGAACATAAACCAGAAGCCATTATACACCGAGATCTTGAGCCTTCAAATATACTGCGGGATGATTCTGGGCATCTGAAAGTTGCAGACTTTGGAGTTAGCAAGTTGCTTAAAGTTGCTAAAACAGTCAAAGAAGACAAACCCGTGACATGCCTGGATACATCATGGCATTATGTTGCTCCAGAGGTCTATAGAAATGAGGAATACGACATAAAAGTGGATGTGTTTTCATTTGCTCTGATATTACAGGAGATGATTGAAGGTTGTCCACCGTTTTATgcaaagccagaaaatgaaGTTCCTAAAGCATATGTTGAAAATGAGCGTCCACCATTTAGAGCTTTGCCAAAGCTTTATGCTTATGGACTAAAACAGTTAATCGAAGAATGCTGGGATGAAAAACCATACAGAAGGCCAACATTTAGGCAAATAATTGGGAGATTGGAAGACATCAGCTACCATCTTGCTCAAAAGAAGCGCTGGAAGGTTCGGGCTCCTGCATGCATCCAGAACCTGGAGGCTCTATTTAGGGGTAATCGCACAAGTCCAAGTAGCCGATCATCTCGCTCTGCGACCAGATAA 1362 0.4728 MEKKLQPRFSLGRQSSLAPERAGAGDSLEALDPTVRLMYLANEGDLDGIKELLDAGSDVNFTDIDGRTALHVAACQARTDVVDLLLRRGAHVDPRDRWGSTPLADAMYYKNHDIVKLLEKHGAKPPMAPMHVQNAREVPEYEIDPSELDFTNSACITKGTFRNALWRGTQVAVKTLGEELFTDDDKVKAFHDELTLLEKIRHPNVVQFLGAVTQSTPMMIVTEYLPQVRDLHAYLKRKGALKPITAVKFALDIARGMNYLHEHKPEAIIHRDLEPSNILRDDSGHLKVADFGVSKLLKVAKTVKEDKPVTCLDTSWHYVAPEVYRNEEYDIKVDVFSFALILQEMIEGCPPFYAKPENEVPKAYVENERPPFRALPKLYAYGLKQLIEECWDEKPYRRPTFRQIIGRLEDISYHLAQKKRWKVRAPACIQNLEALFRGNRTSPSSRSSRSATR 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3415 453 Gene3D Transferase(Phosphotransferase) domain 1 228 429 - -
Ssu6g3415 453 ProSiteProfiles Protein kinase domain profile. 150 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu6g3415 453 Pfam Ankyrin repeats (3 copies) 37 125 IPR002110 GO:0005515
Ssu6g3415 453 SMART ANK_2a 65 96 IPR002110 GO:0005515
Ssu6g3415 453 SMART ANK_2a 98 127 IPR002110 GO:0005515
Ssu6g3415 453 SMART ANK_2a 31 61 IPR002110 GO:0005515
Ssu6g3415 453 Gene3D Phosphorylase Kinase; domain 1 146 225 - -
Ssu6g3415 453 Pfam Protein tyrosine and serine/threonine kinase 157 407 IPR001245 GO:0004672|GO:0006468
Ssu6g3415 453 MobiDBLite consensus disorder prediction 1 25 - -
Ssu6g3415 453 CDD STKc_MAP3K-like 156 408 - -
Ssu6g3415 453 ProSiteProfiles Ankyrin repeat profile. 65 97 IPR002110 GO:0005515
Ssu6g3415 453 PANTHER INTEGRIN-LINKED KINASE FAMILY PROTEIN 9 436 - -
Ssu6g3415 453 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 9 436 - -
Ssu6g3415 453 SUPERFAMILY Protein kinase-like (PK-like) 149 409 IPR011009 -
Ssu6g3415 453 Gene3D - 28 137 IPR036770 -
Ssu6g3415 453 PIRSF ILK 1 431 - -
Ssu6g3415 453 SUPERFAMILY Ankyrin repeat 36 128 IPR036770 -
Ssu6g3415 453 ProSiteProfiles Ankyrin repeat region circular profile. 65 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3415 Ssu-Chr6 76676451 76682892 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g3415 6 431 MAP Kinase Kinase Kinase AT4G18950 65.287 0.0 572
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Ssu6g3415 PK_Tyr_Ser-Thr 8.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3415 - - gmx:100795964 822.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g3415 6 76676451 76682892 Ssu1g3155 1 82556243 82564273 PCT