Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3403 ATGTCATCATCCATGGAAGAAGATAACACCCAAACACACACAATCTTGCCCACATTTCTCAGAAATAAACCAGACCACAAGTCCTTGCATGTTTTCCGTCGAAGCCGAAGGCGGTGGAGGAGAAAGGAAGTGGCTGTGAAAGAGGTGGTGAAgaatgatggtggtggttgtgttaagaaacaacaacaacaagaagaagaagaagaagagaatgaCGGAGAAGAGATAGAGAGGAAGATTCATGCATTGCAGAGGATTGTGCCTGGTGGGGAGTCATTAGATGTGGACCAGCTCTTTGATGAAACTGCTGGCTATATTCTGGCTTTGCAGTGCCAAGCCAAAGCCTTGAGGGCTCTCACTGGCTTCTTTGAGAAGTTGGAGAAGGAGAAGACTAAGTTTGGAGCTTGA 408 0.402 MSSSMEEDNTQTHTILPTFLRNKPDHKSLHVFRRSRRRWRRKEVAVKEVVKNDGGGCVKKQQQQEEEEEENDGEEIERKIHALQRIVPGGESLDVDQLFDETAGYILALQCQAKALRALTGFFEKLEKEKTKFGA 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3403 135 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 28 133 IPR044660 GO:0006355
Ssu6g3403 135 MobiDBLite consensus disorder prediction 55 75 - -
Ssu6g3403 135 CDD bHLH_AtIBH1_like 78 120 IPR044549 GO:0006355
Ssu6g3403 135 Coils Coil 57 86 - -
Ssu6g3403 135 PANTHER TRANSCRIPTION FACTOR PAR1 28 133 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g3403 74 135 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 38.710 6.47e-07 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3403 - - gmx:100817215 132.494