Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3360 ATGGTAGTGAAGGTGTACGGTCCCCACTGTGCTTCCACAAAACGGGTGCTGGTTTGTCTGGTTGAGAAAGAAATCGACTTTGAGGTTGTCCCTGTTGATGTCAGTAAGGGGGAGCAGAAGGATCCTGAGTACCTCAAATTACAGCCCTTTGGAGTTGTTCCTGTCATTAAAGATGGAGATTATACCTTATACGAATCTCGTGCTATAATGAGGTTTTATGCAGAAAAATACAGGTCCCAAGGGGTTGAGTTGCTGGGGAAGACAATAGAAGAGAGGGGTCTTGTGGAGCAATGGCTAGAAGTTGAAGCACAGAACTTCCACCCACCAGCCTACAACTTGGCTATTCATGTTTTGTTTGCTCCATTGTTTGGTATGACCTCAGATCCCAAGGTGATTGAGGAGAGTGAAGCAAAGCTGGGGCAGGTGTTGAACATTTATGAGGAGAGGCTGTCAAAGAGTAAGTACTTGGCTGGGGATTTCTTCAGCCTTGCTGATATtagccaccttccatttattgACTATATTGTGAACAATATGGGGAGAGGGTATTTGATAAAGGAGAGGAAGAATGTGAGTGCCTGGTGGGATGACATAAGTAGTAGACCATCATGGAAAAGGGTTCTTCAGTTATACAGAGCTCCAATCTAG 648 0.4352 MVVKVYGPHCASTKRVLVCLVEKEIDFEVVPVDVSKGEQKDPEYLKLQPFGVVPVIKDGDYTLYESRAIMRFYAEKYRSQGVELLGKTIEERGLVEQWLEVEAQNFHPPAYNLAIHVLFAPLFGMTSDPKVIEESEAKLGQVLNIYEERLSKSKYLAGDFFSLADISHLPFIDYIVNNMGRGYLIKERKNVSAWWDDISSRPSWKRVLQLYRAPI 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3360 215 CDD GST_N_Phi 2 76 - -
Ssu6g3360 215 SFLD Main (cytGST) 4 201 - -
Ssu6g3360 215 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 2 215 - -
Ssu6g3360 215 Pfam Glutathione S-transferase, C-terminal domain 113 202 IPR004046 -
Ssu6g3360 215 SFLD Glutathione Transferase (cytosolic) 4 201 IPR040079 -
Ssu6g3360 215 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 81 IPR004045 -
Ssu6g3360 215 CDD GST_C_Phi 90 208 IPR034347 -
Ssu6g3360 215 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 215 IPR010987 -
Ssu6g3360 215 PANTHER GLUTATHIONE S-TRANSFERASE RHO 2 215 - -
Ssu6g3360 215 Pfam Glutathione S-transferase, N-terminal domain 4 72 IPR004045 -
Ssu6g3360 215 SUPERFAMILY GST C-terminal domain-like 83 209 IPR036282 -
Ssu6g3360 215 Gene3D Glutaredoxin 1 85 - -
Ssu6g3360 215 SUPERFAMILY Thioredoxin-like 6 81 IPR036249 -
Ssu6g3360 215 Gene3D - 86 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3360 Ssu-Chr6 75860737 75861602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g3360 1 215 Glutathione S-transferase Gene Family AT2G30870 60.930 1.70e-98 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3360 K00799 - gmx:547951 393.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g3360 6 75860737 75861602 Ssu6g3360 6 75860737 75861602 ECH