Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3343 ATGGCGTTGTCGGCGAATCGAGATCAGACTCCGAAATCTGACTCCACAAACCCCTGCTGTGACCACTGGAAGAAGAAATACTTGAAGGTGCAGGAATCGCGGAATGTTCTGCGCCAAGCCGTCAAGGTTCTTGAACTCAGACTTAACGAAATCGAGTCCCGCAACAGCAAAGCATGTGGGGTCAAAAAGGAAACGGAGGAAAAATTGGGAGAAATTGTTGCTGCTAGGGTACCATTAGAGAGTGAAGCTTGCAGCTTCAAGTCTCAGACTGATACTCCTATAACTCAGCAGGGACATGGCAGCGATGGGAATGAGAACGGGGACTTACAAGGTTTACTAGCTGATAGGGAAAAGGAAATTGGTACATTGAAGGAGCTTATAGAGGTGGAGAAGGGAAGGGCTGATGCTGAGAGGAAGAAAGCTGCTGAAGTTTGCAAGTTACTAGATGACGAGAAGAATAAGGCTGCTGGAAAGGAAAAGGAAGTTGGTAGATTGAAGGAGCTTCTAGGGGCGGAGAAGAGAAGGGCTGATTCTGAGAGCAAGAAAGCTGCTGAAGCTTGCAAGTTACTAGGAGAAGGGAAGAATTGGGCTGctgaaaaggagaaggaaatcAGTAGATTGAAGGAGCTTCTAGAGGCGAAGAGGAGAAGGGCTGATTCTGATGGCAAGAAAGCTGCTGAAGCTTGCAAGTTActagaagaagagaagaataaGGCCGCTGAAAAGGGGGAGATTGCCAGAATTGAAGCAGAGAAGGCTGAAAAGTATAGGATTCAGATTGGTCAATTGGAGAAACAAGTTTGTGAGGCAAAAACGAAGTTGACGACTGAGATGTCAATGTTGAAAGAGGCAACCAAGAAATTTGAAGCTGAAAAGCGCAAAATATTAGCGGAAAAGAGAAATGTTGAGTCAGGGATGGCCAAAGCGAATGAAAGGTTAGAGGTTGAAAAACAAAAGGCCGATGAGGAAAAAAGGCGTGCAGATGCGGAGATGGTTAAATTAGAGGAGCAGAAAGCACTTGCTGAAGATAACTTGAACAAGTTCATGAAAGAGAAATGTCTAGCTGATCAGATGTCTCAGCAGTTAGAAGAGGATCAGCGAACAATTGAGGATTTGAAACGGAAGATCGATGAACTCTCATCCTTGAGGAAACCTGATGAAAGTGCTGCTGACAGCAATGTCAAAGCTGAAGGTACAAAAGTGAAGCTTCTGAAAAACAAACTTAAGCTTGAAAAGCTACGAGCAAAGCATACCAGGCAAAAATATAAGTTAGAAGCAAGTCGTTACAGCATTTTACGGCACGAATTAGGTCGTCTAAAGATTGATTTCATTCAATTTCTACATCGCCTTGATATACTGGATGCATCCTTTTCACCTGTTGATGGAAGTATGCATGACCAAACAAAGTTTGACAATATACTAGACAAGCAGAATTCAAATGTTATGAGACAAATTTGCAATCTGAATTTGTCTGAGATGCATAGCCAATTTGAAAATGAGCTTCTGGAACCTTGCTGCACAACAATGGATGCAAGTGATCCAGTGAGGAAAAATACGCATCATACTCCACTCCTTGCTCCTGGTGGAAATTACTCCGAATCTATCACAGGTATTGGTTCTAAATTGGAGCCTCTTGTTAGAGGATCCAACAGAACAAAGTTACAGAGTTCTGCAGTAAATTCCAGTACAGAATCTTTTTCTGATGGACAGTTGATGGGCTCACAGGATGCAACCACTTTTCCGGTTTCTGCATCAGCAAAATTGACTCAGGAGATCTTTAATGCTAAACAAAGCATCTGCAACCCATCTGACAGATCTGTTGATGTGCAGCacaggaagaggaagagaatgcATGATACAGTTGAATATATTGCAAATTTGTCTTCCGAGAAACTCTCTGATTTGCATGGTTTGTTGTATAGAAAAGTTGGCAAATGCTTAGAAGGAGGAAAAGAGATGCTTCATAATCTGAATAATTTACAGGAAGAGAATAAAAGGGccaacaaaaagagaaagaaatctCATAGGGAAAAAGTGGACATGACACCTTGGATTAACAGGGATGAGAAAAAGGGCACAGAAGAGGCCAACACTGAGGTCTATGATGATGCAAATGTGTGTAGACACACTTCCTGCCCTGCCCCACATTCTTTAGAAACCACTCAAGCATGTGGGGAGGGGATATGTGATGCTGCAAATAATTTCGATTCCATAATTAGTTTTGATACAGTGGCTGATGGAAGTTATATGAAATTGTTAGAATTAGAAAATGCTACCAGTGAGGAATGCTATAGAAAAGCAATGGATTTTCCCTTGTCTCCATTGCTTCCTGAAATTGAATTTCGTGAAACATTTGATGCAGATAATTTGATGAATCCCTCTCTAGAGGAAGCACTCCAAGAGGACATGTTGAGTTCAAGAACAGACCTGTTTACTTCACCTTGCTTTGATGTAATTAATGTTGAAATCAGTTCTAACGAACAAAAATTTGATGATTCTGGAGTTTCTTGTAATTCACACAAGCACACTACAGAAAATTCAAGGACTGCTTTTTCGGTGGAAGATGGAATTGGATCTTTACACAATCATCTTCCTGAATTTTGTGTTGTCTTTTCAAATATTGAGGACAATAGTATCATATCTAGGATACTTGTTGCTACACAAAATTGTATAGCTAGGTGCAATTTGGCTACTCAAATAGGCTGGGCGGTTAGTAACATTCTTACTGCActtaaaatggaagaaaagcTCTCACAGAAGGAGAAGGTTTCAGTGCTGTTAACACTTCTGCTGTTCAACTTTGCCATGACTGCAACAAAGACATTTGGGAAACTCTGGGATGGGAAATTATTCCATTGCTTGCAATCTTATTCTGAACATATTTGCACAGTTATGTCTGATGCAGAGACAAGAATCCTGTTTGTAGAGAATTATTCTTTGCATGAGCTGCTTGGCCTCATTGAAGATTTTCTAATAGAGGGAAAAGTCATAGTAAACAACAGAGTAGATGTTGAAACTTTGTCTTGTGATTTGAGAGCCAATGATTTTCTGGATTGTGTTAATGAAGTATCTTCTGATGTAGCTTCAAGTGAACAATTGGTGGCAGCAAGTATTATATTAGCATCAGTATGTGCTGCAActgattatgttggatttatTTGTGAGGCTTCATATCATATTCTTAGATTGTGCAAGTGGGATTCTTTGATGGTGCTGACTATTCTTCATATTTTTGCTTATCTGGgtggagagaaattttttaacacagataattttggtttaatggTGACTGTTCTGAAGTCTGTAATTATGTTTCTTGAGGGTGGGAGCCTATCTGTAGCTACTGCTTGTCTTCCTTCAATAAATCAGCTGCATGCTGAATTGTGTGTGAATTTTAAATGCCCATTCTTGGAAGGTGCTGAATCCATTGATGTAGTTACATGTTTGCTCTTGGaagagttaaaaaattgttgcatTCAAGGGATGAAACGAGTAGATTCGTCAGATTCTAGGTTCATGTCAGACAATTATAATGCTGGACAATGGTATAATCGGGATGCAGTTCAGCGTGCCATTAACAAGAACTGTGAGGTGCCCTGTTCAAAAAAATGCTTGATTTCTGCTACTCAACCAGATGCCCTTAAGAAGGCCACCTTTTGTCACCTGAATGATGTCCTGTCATTGGTGGAACTGGTAGCAAACAAAATGAGCTGGCACTGGGCTGATATGAAGCTTGTTCCTCAGCTGCTGAATATACTCGACTCATGTGTAGAGGAGAAATTTGCTATTCGTATAATTGTTCTTCTAGATCAACTTGGGAGGATTGGAGTTGATGTTGGTGGATATGAAGATCAAGGAGTTGGGAACTTGAGATGTTATTTGTGTGCGTATTTATGCCGCACCTCTTCCATGGAAGCGGGCCTTTCTCTTCAAATTGCCGCTGCCACTGCTCTGTTGGGCCTTCTTCCTCTCGATTTTGAAACCCTTTTTCATACTAACATCAATCTTCCAGCATATTCTAGATCTGTTTCTGACAATGCTGAAACTTTGAGGAAGTGGTTCTCTGGGCTGGGTAAAGAACAACAGAAATTGCTGTCTCTGGTATTTTAA 4110 0.3922 MALSANRDQTPKSDSTNPCCDHWKKKYLKVQESRNVLRQAVKVLELRLNEIESRNSKACGVKKETEEKLGEIVAARVPLESEACSFKSQTDTPITQQGHGSDGNENGDLQGLLADREKEIGTLKELIEVEKGRADAERKKAAEVCKLLDDEKNKAAGKEKEVGRLKELLGAEKRRADSESKKAAEACKLLGEGKNWAAEKEKEISRLKELLEAKRRRADSDGKKAAEACKLLEEEKNKAAEKGEIARIEAEKAEKYRIQIGQLEKQVCEAKTKLTTEMSMLKEATKKFEAEKRKILAEKRNVESGMAKANERLEVEKQKADEEKRRADAEMVKLEEQKALAEDNLNKFMKEKCLADQMSQQLEEDQRTIEDLKRKIDELSSLRKPDESAADSNVKAEGTKVKLLKNKLKLEKLRAKHTRQKYKLEASRYSILRHELGRLKIDFIQFLHRLDILDASFSPVDGSMHDQTKFDNILDKQNSNVMRQICNLNLSEMHSQFENELLEPCCTTMDASDPVRKNTHHTPLLAPGGNYSESITGIGSKLEPLVRGSNRTKLQSSAVNSSTESFSDGQLMGSQDATTFPVSASAKLTQEIFNAKQSICNPSDRSVDVQHRKRKRMHDTVEYIANLSSEKLSDLHGLLYRKVGKCLEGGKEMLHNLNNLQEENKRANKKRKKSHREKVDMTPWINRDEKKGTEEANTEVYDDANVCRHTSCPAPHSLETTQACGEGICDAANNFDSIISFDTVADGSYMKLLELENATSEECYRKAMDFPLSPLLPEIEFRETFDADNLMNPSLEEALQEDMLSSRTDLFTSPCFDVINVEISSNEQKFDDSGVSCNSHKHTTENSRTAFSVEDGIGSLHNHLPEFCVVFSNIEDNSIISRILVATQNCIARCNLATQIGWAVSNILTALKMEEKLSQKEKVSVLLTLLLFNFAMTATKTFGKLWDGKLFHCLQSYSEHICTVMSDAETRILFVENYSLHELLGLIEDFLIEGKVIVNNRVDVETLSCDLRANDFLDCVNEVSSDVASSEQLVAASIILASVCAATDYVGFICEASYHILRLCKWDSLMVLTILHIFAYLGGEKFFNTDNFGLMVTVLKSVIMFLEGGSLSVATACLPSINQLHAELCVNFKCPFLEGAESIDVVTCLLLEELKNCCIQGMKRVDSSDSRFMSDNYNAGQWYNRDAVQRAINKNCEVPCSKKCLISATQPDALKKATFCHLNDVLSLVELVANKMSWHWADMKLVPQLLNILDSCVEEKFAIRIIVLLDQLGRIGVDVGGYEDQGVGNLRCYLCAYLCRTSSMEAGLSLQIAAATALLGLLPLDFETLFHTNINLPAYSRSVSDNAETLRKWFSGLGKEQQKLLSLVF 1369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3343 1369 Coils Coil 650 677 - -
Ssu6g3343 1369 Coils Coil 148 168 - -
Ssu6g3343 1369 Coils Coil 355 382 - -
Ssu6g3343 1369 Coils Coil 197 217 - -
Ssu6g3343 1369 Coils Coil 222 266 - -
Ssu6g3343 1369 Coils Coil 34 54 - -
Ssu6g3343 1369 PANTHER - 8 157 - -
Ssu6g3343 1369 PANTHER - 198 1368 - -
Ssu6g3343 1369 PANTHER - 158 195 - -
Ssu6g3343 1369 Coils Coil 281 351 - -
Ssu6g3343 1369 MobiDBLite consensus disorder prediction 84 104 - -
Ssu6g3343 1369 MobiDBLite consensus disorder prediction 84 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3343 Ssu-Chr6 75542863 75549268 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g3343 103 466 Myosins gene family AT2G33240 24.806 2.65e-06 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3343 - - gmx:100781106 1914.04