Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3305 ATGTCAATGTTGAGATCAGTTTGTCATTTAAGAGTGGCAACTCCAAAAGCTTGCCTCCGTCCCTCAatgttcttcttctccttttctcatTCCCACCCTCTCACTCACACCTCTTTTTCCAGAACCTTCCGTTTCCATCCACCTTCGCTTCCTCTTTCACCCTTTGCTTCCATGAAAGCAACAGCTTCATATGGCACTGGGGGTAGTGGTGCTGAAGGTGGTAGGCCAAGGGAGATATTGGTGCAGCATTTGTTGGTCAAAGAAGATGACCAGAAGCTTCTGTTGGATCTTCAGCACAGAATCTCTGCAGGTGAAGATTTGAGTGATCTTGCTGTGGATTATTCAATGTGCCCGTCcaaagaagaaggaggaatgcTTGGGTGGGTCAGAAAGGGACAAATGGTTCCTGAATTTGAAGAGGCTGCATTTAGTGCACCTTTAAACAAAGTTGTGAGGTGCAAAACGAAATTTGGATGGCACCTGCTGCAGGTTTTATCTGAAAGGGAAGAATCAATTCTTCAAGACATTCAACCTGATGAACTGCATGTGAAAATTCAAGATCCCAGCTTTCTGGAGGAGGCACAGTTAATTGATGTTCGAGAGCCTGAAGAAGTGGCCAAAGCATCTTTGCCAGGATTTACCGTTCTTCCCCTCCGACAATTTGGAAGCTGGGGGCCTGAAATAACTACAAAATTTGACCCTCAAAAGGATACATATGTTATGTGTCATCATGGCATGCGGTCCTTACAGGTTGCCAAGTGGTTGCAGTCGCAGGGATTTAGGAAAGTATACAATCTTTCTGGGGGAATCCATGCCTATGCTGTCCAGGTTGATCAATCAGTCCCCACATACTGA 855 0.4339 MSMLRSVCHLRVATPKACLRPSMFFFSFSHSHPLTHTSFSRTFRFHPPSLPLSPFASMKATASYGTGGSGAEGGRPREILVQHLLVKEDDQKLLLDLQHRISAGEDLSDLAVDYSMCPSKEEGGMLGWVRKGQMVPEFEEAAFSAPLNKVVRCKTKFGWHLLQVLSEREESILQDIQPDELHVKIQDPSFLEEAQLIDVREPEEVAKASLPGFTVLPLRQFGSWGPEITTKFDPQKDTYVMCHHGMRSLQVAKWLQSQGFRKVYNLSGGIHAYAVQVDQSVPTY 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3305 284 ProSiteProfiles PpiC-type peptidyl-prolyl cis-trans isomerase family profile. 76 166 IPR000297 GO:0003755
Ssu6g3305 284 Pfam Rhodanese-like domain 191 274 IPR001763 -
Ssu6g3305 284 Gene3D - 170 282 IPR036873 -
Ssu6g3305 284 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 172 282 IPR036873 -
Ssu6g3305 284 ProSiteProfiles Rhodanese domain profile. 190 282 IPR001763 -
Ssu6g3305 284 SMART rhod_4 176 279 IPR001763 -
Ssu6g3305 284 Pfam PPIC-type PPIASE domain 86 166 - -
Ssu6g3305 284 Gene3D - 75 169 IPR046357 GO:0003755
Ssu6g3305 284 SUPERFAMILY FKBP-like 75 165 - -
Ssu6g3305 284 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 21 284 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g3305 77 284 Sulfurtransferasese or Rhodanese AT5G19370 66.346 4.67e-103 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3305 - - gmx:100803404 461.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g3305 6 74884423 74888187 Ssu6g3305 6 74884423 74888187 ECH