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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Ssu6g3297
ATGGCTTTCACACTAGACAGGTGTGAAGATAGCATTGTGTTCACTATGGAGTCCCAGAAGTCAGTGCCTGCTCCCTTCCTGACAAAGACATACCAACTTGTTGATGACCCTTGCACTGACCACATTGTGTCTTGGGGTGATGATGAAACTACATTTGTTGTGAGGAGGCCCCCAGAGTTTGCTAGAGATCTTCTTCCCAACTATTTCAAGCACAACAACTTCTCAAGCTTTGTTAGGCAGCTAAATACCTATGGTTTCAAGAAAGTAGCTGCTGATAGGTGGGAGTTTGCAAATGAATACTTCAGAAAAGGAGCTAAGCACCTTCTATGTGAAATCCACAGGAAAAAAACCCCTCACCACTATCAACAACACTACCATATGCATGACCAACCACAACAACTTCTTCAGCCAGATGAAAATCTGTGTTGGATTGATACTCCTCCACTACCATCTCCTAAGCCAGACACTGATATCCTAACAGCACTTTCTGAGGACAACCAAAGACTGAGGAGAAAGAACTTCATGCTCTTATCAGAACTCACTCACATGAAGAATCTATACAATGACATCATATATTTCATCCAAAACCATGTAAGTCCTGCTTCCTATGAACAAAGAAGTAGCAACAGTGCTATTTTGAAGCTGGTAGAATTGGATTTATCACCTCAATCACCAAATGTTATTAAACCAGCTAAGAGTTGTATAATGGAGAAGTCTTTGATAACTTCTAGTGAGGAGCCTAATAGTTCTGTGAAGCTCTTTGGGGTCCCTCTTTGTGGCAAAAAGAGATTGCACCCAGGTAACCTTGATCAACAAAAATAG
822
0.4136
MAFTLDRCEDSIVFTMESQKSVPAPFLTKTYQLVDDPCTDHIVSWGDDETTFVVRRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFKKVAADRWEFANEYFRKGAKHLLCEIHRKKTPHHYQQHYHMHDQPQQLLQPDENLCWIDTPPLPSPKPDTDILTALSEDNQRLRRKNFMLLSELTHMKNLYNDIIYFIQNHVSPASYEQRSSNSAILKLVELDLSPQSPNVIKPAKSCIMEKSLITSSEEPNSSVKLFGVPLCGKKRLHPGNLDQQK
273
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Ssu6g3297
273
PANTHER
HEAT SHOCK TRANSCRIPTION FACTOR
17
263
IPR027725
-
Ssu6g3297
273
SUPERFAMILY
"Winged helix" DNA-binding domain
23
115
IPR036390
-
Ssu6g3297
273
ProSitePatterns
HSF-type DNA-binding domain signature.
65
89
IPR000232
GO:0003700|GO:0006355|GO:0043565
Ssu6g3297
273
PRINTS
Heat shock factor (HSF) domain signature
26
49
IPR000232
GO:0003700|GO:0006355|GO:0043565
Ssu6g3297
273
PRINTS
Heat shock factor (HSF) domain signature
64
76
IPR000232
GO:0003700|GO:0006355|GO:0043565
Ssu6g3297
273
PRINTS
Heat shock factor (HSF) domain signature
77
89
IPR000232
GO:0003700|GO:0006355|GO:0043565
Ssu6g3297
273
Pfam
HSF-type DNA-binding
26
115
IPR000232
GO:0003700|GO:0006355|GO:0043565
Ssu6g3297
273
Gene3D
-
18
117
IPR036388
-
Ssu6g3297
273
PANTHER
HEAT STRESS TRANSCRIPTION FACTOR B-4D
17
263
-
-
Ssu6g3297
273
SMART
hsfneu3
22
115
IPR000232
GO:0003700|GO:0006355|GO:0043565
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Ssu6g3297
Ssu-Chr6
74840344
74841522
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Ssu6g3297
10
265
HSF
AT1G46264
49.835
1.65e-87
263
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
HSF
Ssu6g3297
HSF_DNA-bind
4.9e-32
CL0123
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Ssu6g3297
K09419
-
gmx:100776060
505.753
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Ssu6g3297
6
74840344
74841522
Ssu6g3297
6
74840344
74841522
ECH
Ssu9g0704
9
31598889
31600332
Ssu6g3297
6
74840344
74841522
PCT
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