Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3289 ATGAAACAGGGAAGAAGCTCTTTTGGTTCTATGTCCTCAACTGTCCCTTGTCTTCTCCTCCTTTTCTTCTGTTTCTCAGGATCTGCTGAGGCCTACAAGAATTATACAGTGGGAGACTCTATAGGCTGGTTTGACAATACTGAGAAGCCCGATGTCAATTACCAGAAGTGGGCTGCCAATAAAGAGTTCAGCTTGGGAGATTTCCTCATTTTCAACACGGACACTAACCACTCTGTGGTTCAGACATACAATTTAACCACATACAAACTATGTGATTACGATGATGCACAAGACAAGGACACAAACCAATGGTCAACATCCGATCCGTCCAACACCCAGACACACCCTGTGACAGTGGCGGTTCCTTTGGTGAAGGAGGGGATGACATACTTCTTTTCTGGTGACTATGATGGTGATCAGTGCAAGAATGGacaacaattcaaaataaatgtgaCTTATGGACAAGGGTTGCCCAAGAGTCTTAAAACTTCCCCAGAAGATGCCCCATCTCCTGCCAGTCCTGTTGCTGGAGACGATGATTCAGCACCAGACACTATTGTTCCTTCCAATTTCAGCAATCCCAAGGAAGAAAGTGACGATGACAAAGATAGTGACAAACAGAAATCTAGTTCTGTTTCAATCTTAATGTATGCACAACTTCACATTGTCTTGTTAGGGatacttttcttgttttaa 696 0.4181 MKQGRSSFGSMSSTVPCLLLLFFCFSGSAEAYKNYTVGDSIGWFDNTEKPDVNYQKWAANKEFSLGDFLIFNTDTNHSVVQTYNLTTYKLCDYDDAQDKDTNQWSTSDPSNTQTHPVTVAVPLVKEGMTYFFSGDYDGDQCKNGQQFKINVTYGQGLPKSLKTSPEDAPSPASPVAGDDDSAPDTIVPSNFSNPKEESDDDKDSDKQKSSSVSILMYAQLHIVLLGILFLF 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3289 231 ProSiteProfiles Phytocyanin domain profile. 33 153 IPR003245 GO:0009055
Ssu6g3289 231 MobiDBLite consensus disorder prediction 194 208 - -
Ssu6g3289 231 Gene3D - 31 153 IPR008972 -
Ssu6g3289 231 CDD Phytocyanin 33 151 - -
Ssu6g3289 231 PANTHER BNAA08G26900D PROTEIN 13 225 - -
Ssu6g3289 231 PANTHER BLUE COPPER PROTEIN 13 225 IPR039391 GO:0009055
Ssu6g3289 231 MobiDBLite consensus disorder prediction 158 208 - -
Ssu6g3289 231 Pfam Plastocyanin-like domain 43 145 IPR003245 GO:0009055
Ssu6g3289 231 SUPERFAMILY Cupredoxins 33 151 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3289 Ssu-Chr6 74725015 74727220 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g3289 10 203 Phytocyanin Superfamily AT1G08500 61.500 1.13e-80 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3289 - - ccaj:109789262 382.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g3289 6 74725015 74727220 Ssu6g3289 6 74725015 74727220 ECH