Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3283 ATGGGGACAAATGAGACCCTAACAAGcataaacaaaacaattttcaGTACAGTAATGTTTGACAAGGTCAAATCAGACCCAgacagaaaatttatttattataatgttacCGTTGACATGCCACCCAAGATAGTATCCGACGGCATCTGGGGTAACACAACTTATGGCGCATTACCTAACAGAGCGACAATACCACTGTTGGAGCTCCAAATTATCACCATTTTCGCCATCACGCAATGCTTTCATTTGGTACTTAAGCGCCTGGGGTTCCCTTATTTCGTTTCACAAATGATGGCTGGGTTTGTTCTCGGCCCTTCTCTCAAGATAGACGCAATGaaactaatgaaaaatatgttgttCCCTTACGGGAGTGAAGACTTATTGAACCTAATATCAGGAGTTGGCTACGCATTCTTCCTATTTCTAACTGGGGTGCAAATGGATTTTAGCATGATAACTAGAACCGGCAAGAAAGCTTGGACAATCGCTCTCTCCTCCCTAATGATTCCCTCGGTTGTTGGTCTCATCGTATGCTACAAATTCATGGGGCATTGGCAGAGAACCCTCGGAGAGTTTGACGGAGGAAAACTTCCCGTGATAGTATTAGGCCACAGTGGGTGTTCCTTCCCGGTGATAGCTTCTCTACTCTCTGATCTTGAGATATTGAACTCTGAACTTGGACGCTTAGCACTCTCAGCAGCACTTGTTATGGATGTGATCACTGCAATTGCGACAGGACTAGGCACTGCTATTATGAGCAGCCTTAGAACTGATTCTCATGATCATGACCTAAGCAAGGGACCTGAACTTGCCCTCTACACTGCCATAAAATTCGTTACTTTTGTGACACTTGTGGCTATAATTGCACGCCCCGCAATGAGGCGGATTGTGAGGAACACCCCCGAAGGTAGACCTGTGAAGAAAGCATACACGTATGTGGTGATCCTCATGACCCTTTTGGCAGGGTTGTTAGGCATATTTGGTAACCAGACTGTGTTAGGTGGGGTGTTACTCCTTGGTCTTCTTGTGCCAGAAGGTCCTCCGTTGGGGTCTGAATTGATTAAGCAGATGGAGCTGTTCTCCACGTGGTTCCTTTTGCCTATCTTTGTCACATGTTGTGCCATGAAGGTGGATATTTCCACGCACCTTAATGGCACGTTGGTTCTCGTTGTAGCCACCGTGATTGTGGTTGTGCATTTGCTTAAGATGCTTATAACAATTGGAATTTGCCGGTACTGCCACATGCCCAAAACGGACGGTTTGTGCCTCGCTCTCATGTTGAGCTGCAAAGGTGTCGTGGACTTTTGCACCGAAGTGTTTCTGTATGATTCAATGTTATTGAGCAATGGAACAGTGGCCATAATGGCTGTATCAGTGTTGGTGTTGGGAAGCATTGCACGCATTGGGGTGAAATCCTTATACGACCCATCAAGGAAATACGTAGGCTATCAGAAACGGAACATACTCAATTTGAAACCCAACTCAGAGCTTCGGATCGTCGCATGCATCCACAAACCAAGCCACACAATGTCCGTGAAAAACGCCCTTGACATTTTCTGCCCCACAACAAGCAACCCCCTCGTGGTTCACGTCTTGCACCTCATGGAATTAGTTGGTAGATCCTCTCCCATCTTCATCTCACACCGTCTCCAAGAAAGGGTTGGCTCAGGCCACAACTACTCCGAAGATGTCATTGTCACGTTCGACCTCTTCGAACATGACAATGCTGGCACTGCTTCCGTTAGCACCTACACAGCCATATCTCCCTTACGTTTCATGCATGATGACATTTGCTACCTCGCGTTGGACAAGCTCGCTTCCATCATCGTTCTTCCCTTTCACGTGAGATGGGGTGAGGATGGTTCCGTTGAATCCACGGATGAAAACATAAGAACTCTGAACTCGAAGGTCCTTGAAAGGGCACCATGCTCCGTGGGGATTCTCGTGAACCGAGGCTCTTCTTCTAATGCTTCAATGAAGCAAATAGCAATGGTTTTCTTGGGGGGTTCGGATGATAGAGAGGCACTGTGCTTGGCTAAGAGGACGATCAAAGATTGCGCCTATAAGTTGGTTGTGTACCACTTGGTTTCGAGCCACAGTGGGTCAAACTGGGACCTCGTGCTCGATGGTGAGGTGCTAAAGAGTGTTAAGGGCTACTATGGTAGTGTTGAGAATGTGACTTACGAAAAGGTCACAATTGAGGAGCCTTCTGAGACCACTGCTTTTTTATCGGATATAGCAAATCTGCATGATTTTATTATAGTTGGGAGACGTAATGGAGTCAAATCGCCTCAAACAGCAGCACTTGAAAATTGGACAGAGTTTTCTGAGTTGGATTCTGCGGACCTTTCAAAAATCGTGCAAAATGCTTTCCTAGCATCTGATCTCTGA 2391 0.4546 MGTNETLTSINKTIFSTVMFDKVKSDPDRKFIYYNVTVDMPPKIVSDGIWGNTTYGALPNRATIPLLELQIITIFAITQCFHLVLKRLGFPYFVSQMMAGFVLGPSLKIDAMKLMKNMLFPYGSEDLLNLISGVGYAFFLFLTGVQMDFSMITRTGKKAWTIALSSLMIPSVVGLIVCYKFMGHWQRTLGEFDGGKLPVIVLGHSGCSFPVIASLLSDLEILNSELGRLALSAALVMDVITAIATGLGTAIMSSLRTDSHDHDLSKGPELALYTAIKFVTFVTLVAIIARPAMRRIVRNTPEGRPVKKAYTYVVILMTLLAGLLGIFGNQTVLGGVLLLGLLVPEGPPLGSELIKQMELFSTWFLLPIFVTCCAMKVDISTHLNGTLVLVVATVIVVVHLLKMLITIGICRYCHMPKTDGLCLALMLSCKGVVDFCTEVFLYDSMLLSNGTVAIMAVSVLVLGSIARIGVKSLYDPSRKYVGYQKRNILNLKPNSELRIVACIHKPSHTMSVKNALDIFCPTTSNPLVVHVLHLMELVGRSSPIFISHRLQERVGSGHNYSEDVIVTFDLFEHDNAGTASVSTYTAISPLRFMHDDICYLALDKLASIIVLPFHVRWGEDGSVESTDENIRTLNSKVLERAPCSVGILVNRGSSSNASMKQIAMVFLGGSDDREALCLAKRTIKDCAYKLVVYHLVSSHSGSNWDLVLDGEVLKSVKGYYGSVENVTYEKVTIEEPSETTAFLSDIANLHDFIIVGRRNGVKSPQTAALENWTEFSELDSADLSKIVQNAFLASDL 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3283 796 PANTHER CATION/H + ANTIPORTER 19 779 - -
Ssu6g3283 796 PANTHER CATION/H+ EXCHANGER 2 19 779 - -
Ssu6g3283 796 Pfam Sodium/hydrogen exchanger family 74 463 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Ssu6g3283 796 Gene3D - 66 480 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3283 Ssu-Chr6 74633209 74640734 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g3283 40 778 Antiporter Super Family AT3G44900 36.563 6.57e-152 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3283 - - gmx:100778180 1216.83