Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3282 ATGGGGACAAACGAGACCCTAATAAGCATAAGCAGAACAATTTTCGCTGCAGTAGCGTTCGACAAGACCAGGTCAGACCCAGAcagaaaatatctttattatgaTATTTCCATTGACATGCCACCCAAGGTAGTATGCGATGGCATCTGGGGTGACACAGCTTATGGCGCATTGCCTTCAAGAGCGACAATGCCACTGTTGGAGACCCAAATTATCACCATTTTCGTCATCACGCAATGCTTTCATTTGGTACTCAAGCGCCTGGGGTTCCCCTATTTTGTTTCACAAGTGATGGCTGGGTTTGTTCTAGGCCCTTCTCTCAAGATAGGCGCATTGAAAGCACAGAAAGACATGTTGTTCCCTTACGGGAGTGAAGACTTACTGAACCTAATATCAGCATTCGGCTACGCATTCTTCCTATTTCTTACTGGGGTGCAAATGGATTTCAGCATGATAACCAGAACCGGCAAGAAAGCCTGGACAATCGCTCTCTCCTCCCTGATGATTCCCACGGCTGTCGGTCTCGGCCTATGCTACAAATTCATAGGGCACTGGCAAAAAGCCCTCGGAGAGTTTGACGGAGGAAAACTTGCCGTCATAGTAATAGGCCACAGTGGGTGTTCCTTCCCGGTGATAGTTTCTCTGCTCTCTGATCTTGAGATATTGAACTCCGAACTCGGACGCTTAGCACTCTCGGCAGCACTTGTTATGGATGTGATCGGCGTAGTTGCGACGGGACTTGGCACCGCCGTTACGAGCAGCCTTAGAATTGATTCTCACGATCGTGACCTACGCAAGGGACCCACGCTTGCCCTCTACACCGCCATAAAATACGTTACTTTTGTGACGCTTGTGATAATCATTGCACGCCCCGCGATGAGGCGGATTGTGAGGAACACGCCCGAAGGTAGACCCGTGAAGAAATCGTACACCTACGTGGTGATCCTCATGACCTTTTTCGCGGGGTTGTTAGGAATATTTGGTAACCAGACCGTGTTAGGTGGGGTGTTGCTCCTCGGTCTTCTTGTGCCGGAAGGTCCTCCGCTGGGGTCTGAATTGATTAAGCAGTTGGAGTTGTTCTCCACGTGGTTCCTTGCGCCAATCTTTGTCACGTGTTGCGCCATGAAGGTGGATATTTCCGCTCACATTAATGCCGAGTTGGTTCTCGTCGTGGCCGCCTTGATTGTGGTCGTGCACTTGCTTAAGGTGCTTATAACCATCGGGATTTGCCGATATTGCCGCATGCCTAAGACGGATGGTTTGTGCCTCGCTCTCATGTTGAGCTGCAAAGGTGTCGTGGACTTCTGCACCAGTGTGTTTCTATATGATTCGTTGTTATTGAGCAGCGGAACAGTGGCCATAATGGCTGTATCAGTGTTGGTGTTGGGAAGCATTGCACGCATTGGGGTGAAATCCTTATACGACCCATCAAGGAAATACGCAGGCTATCAGAAAAGGAACATACTAGACCTGAAACCCAACTCAGAGCTTCGGATCATCGCATGCATCCACAAACCAAGCCACACAATGTCCGTGAAAAACGCCCTTGACATTTTCTGCCCCACAACAAGCAACCCCCTCGTGGTTCACGTCTTGCACCTCATGGAGTTGGTTGGTAGATCCTCTCCCATCTTCATCTCACACCGTCTCCAAGAAAGGGTTAGCTCAGGCCACAACTACTCCGAAGATGTCATTGTCACGTTCGACCTCTTCGAACACGACAATGCTGGCACTGCTTCCGTTAGCACCTACACAGCCATATCTCCTTTACGCTTCATGCATGATGATATATGTTACCTTGCATTGGACAAACTCGCTTCCATCATCATTCTTCCCTTTCACGTGAGATGGGGTGAGGATGGTTCCGTCGAGTCAACAGATGAAAACATAAGAACTTTGAACACCAAGGTCCTTGAAAGGGCACCGTGCTCCGTGGGGATTCTCGTGAACCGAGGTGCTTCTTTTACTCACAACACTTCAGTGAAGCAAATAGCGATGGTTTTCTTGGGGGGTTCAGATGACAGAGAGGCACTCTGCTTGGCTAAGAGGGCCATCAAAGATTGTGCTTATAAGTTGGTTGCGTACCACTTGGTTTCGAGCCACAGTGAGTCAAACAACTGGGATTTCATGCTCGATGATGAGGTGCTAAAGAGTGTTAATGGGTGCTATGGAAGTGTTGAGAATGTGACTTATGAAAAGGTCACTATTGAGGACCCTTCTGAGACCACTGCTTTTTTATCGGATATAGCAAATCTGCATGATTTTATTATAGTTGGGAGACGTAATGGGGTCAAATCGTCTCAGACAGCAGCACTTGGAGATTGGACAGAGTTTTCTGAGTTGGGTGTTATTGGAGATTTGCTTGCTTCCTCAGATACCAATACTAATGCTTCAATTCTAGTtgtgcaacaacaacaaatgcCCAAGTCGTGA 2433 0.476 MGTNETLISISRTIFAAVAFDKTRSDPDRKYLYYDISIDMPPKVVCDGIWGDTAYGALPSRATMPLLETQIITIFVITQCFHLVLKRLGFPYFVSQVMAGFVLGPSLKIGALKAQKDMLFPYGSEDLLNLISAFGYAFFLFLTGVQMDFSMITRTGKKAWTIALSSLMIPTAVGLGLCYKFIGHWQKALGEFDGGKLAVIVIGHSGCSFPVIVSLLSDLEILNSELGRLALSAALVMDVIGVVATGLGTAVTSSLRIDSHDRDLRKGPTLALYTAIKYVTFVTLVIIIARPAMRRIVRNTPEGRPVKKSYTYVVILMTFFAGLLGIFGNQTVLGGVLLLGLLVPEGPPLGSELIKQLELFSTWFLAPIFVTCCAMKVDISAHINAELVLVVAALIVVVHLLKVLITIGICRYCRMPKTDGLCLALMLSCKGVVDFCTSVFLYDSLLLSSGTVAIMAVSVLVLGSIARIGVKSLYDPSRKYAGYQKRNILDLKPNSELRIIACIHKPSHTMSVKNALDIFCPTTSNPLVVHVLHLMELVGRSSPIFISHRLQERVSSGHNYSEDVIVTFDLFEHDNAGTASVSTYTAISPLRFMHDDICYLALDKLASIIILPFHVRWGEDGSVESTDENIRTLNTKVLERAPCSVGILVNRGASFTHNTSVKQIAMVFLGGSDDREALCLAKRAIKDCAYKLVAYHLVSSHSESNNWDFMLDDEVLKSVNGCYGSVENVTYEKVTIEDPSETTAFLSDIANLHDFIIVGRRNGVKSSQTAALGDWTEFSELGVIGDLLASSDTNTNASILVVQQQQMPKS 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3282 810 PANTHER CATION/H+ EXCHANGER 2 19 808 - -
Ssu6g3282 810 Gene3D - 67 481 IPR038770 -
Ssu6g3282 810 PANTHER CATION/H + ANTIPORTER 19 808 - -
Ssu6g3282 810 Pfam Sodium/hydrogen exchanger family 73 463 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3282 Ssu-Chr6 74620427 74624550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g3282 65 802 Antiporter Super Family AT3G44900 38.532 1.33e-161 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3282 - - gmx:100778180 1230.7