Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3255 ATGTACAATGTACTAGAGGTGAACAAAACTAGTTATGAGAACTGCATGGACGCAGGATTTATTCGAAACATATCAAGGGGTGGAGGAAGAGACGTGTTTCAACTGACGGACGCCAAGACCTACTACTTCATAAGTGAAGGAGGCTTTTGTTGGCATGGGATGAAGGTTGCTATACATGTTACTGAAGGTGTTGCACCCACTCTAGCACCTTCACCAAATGCTTCAGATGCTTGTGGCATTCAGGTCAACCTCATACTTTCGTTGTTCATCTTTGTCTTGATCTGGGGTATCTCTTCAAATAACATCAGCTACTAG 315 0.4317 MYNVLEVNKTSYENCMDAGFIRNISRGGGRDVFQLTDAKTYYFISEGGFCWHGMKVAIHVTEGVAPTLAPSPNASDACGIQVNLILSLFIFVLIWGISSNNISY 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3255 104 Gene3D - 1 61 IPR008972 -
Ssu6g3255 104 ProSiteProfiles Phytocyanin domain profile. 1 62 IPR003245 GO:0009055
Ssu6g3255 104 PANTHER OS03G0758500 PROTEIN 1 84 - -
Ssu6g3255 104 SUPERFAMILY Cupredoxins 2 60 IPR008972 -
Ssu6g3255 104 Pfam Plastocyanin-like domain 3 54 IPR003245 GO:0009055
Ssu6g3255 104 PANTHER BLUE COPPER PROTEIN 1 84 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3255 Ssu-Chr6 74158510 74158824 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g3255 2 71 Phytocyanin Superfamily AT2G27035 54.286 9.41e-20 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3255 - - gmx:100812113 142.51