Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3254 ATGTACAATGTACTAGAGGTGAACAAGACTGGTTATGAGAAATGCGTGGACAAGGGATTTATTCAGAACATATCAAGGGGTGCAGGAAGAGACGTGTTTCAGCTGACAGAGTTCAAGACCTACTACTTCTTAAGTGGAGGAGGCTATTGTTGGCATGGGATGAAGGTTGCTATAAATGTTACTGAAGGTGTTGCTGCACCCACTCCAGCACCCGCTCCAGTACCTTCACCAAAAAGTGGTGCTCCAGCACCTTCACCAAAAAGTGGTTCTGCTTCAGATAGCATTCAGGTCAACCAAATACTTCTGGTATTCATCTTTGTCTTGATGTGGGGTATCTCTTCAAATAACATCAGCTACTAG 360 0.4417 MYNVLEVNKTGYEKCVDKGFIQNISRGAGRDVFQLTEFKTYYFLSGGGYCWHGMKVAINVTEGVAAPTPAPAPVPSPKSGAPAPSPKSGSASDSIQVNQILLVFIFVLMWGISSNNISY 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3254 119 MobiDBLite consensus disorder prediction 67 92 - -
Ssu6g3254 119 PANTHER OS03G0758500 PROTEIN 1 109 - -
Ssu6g3254 119 Pfam Plastocyanin-like domain 3 54 IPR003245 GO:0009055
Ssu6g3254 119 Gene3D - 1 61 IPR008972 -
Ssu6g3254 119 SUPERFAMILY Cupredoxins 2 60 IPR008972 -
Ssu6g3254 119 ProSiteProfiles Phytocyanin domain profile. 1 62 IPR003245 GO:0009055
Ssu6g3254 119 MobiDBLite consensus disorder prediction 68 82 - -
Ssu6g3254 119 PANTHER BLUE COPPER PROTEIN 1 109 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3254 Ssu-Chr6 74148685 74149044 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g3254 2 103 Phytocyanin Superfamily AT2G27035 46.602 3.34e-22 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3254 - - gmx:100812113 166.392