Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3247 ATGTTTGTGTCGTTGATGCTTGGATTAGGAGCTACTGGGAAAGGTATGCAGGCTATCTGGTTGATGCTATTGTTGTTGGTGGATATTGGATTGGGGAATTCAGATATTGATGCACTCCTTGAATTCAAGAAGAGTATTCAGAAGGACGCTTCTGGATTAGTTGTGAATTCTTGGGATTTCAAGTCTTTAGATACCAATGGATGCCCTCAGAACTGGTATGGGATATTGTGTAGTGAAGGCAATGTTATATCAATCACTCTGGATAATGCTGGTTTGGTTGGCGAGTTTAATTTCCTTGCAATTAGTGGCCTTACAATGCTTCGCAACTTGTCAGCTGTGAACAACCAGTTCACAGGAGATCTCTTACATATGGGTGCAATGGAATCACTTGAATATCTTGATTTGTCCCTTAACAAGTTTAATGGGCCGTTACTCTCTAACTTCGTTCAATTGCACAAGTTAGTATATCTGAATCTTTCTTCAAATGAGTTTGGAGGTACTCTTCCTATTGAGTTTCACAAACTTGAGCAGTTGAAGTACTTAGATTTGCACACGAATAACTTTTCTGGGGATATTATGCATATCATTTCTCAGATGGGTAGTGTGCTATATGTTGACATGAGCAGCAACAGGTTTTCTGGTACACTGGATTTGGGAATTGGAGATGAGTCATTTCTCTCctcaattcaatatttaaacATTAGCCATAATTCCTTGAGTGGTGAGTTATTTGCTCATGATGGTATGCCATACCTTGACAATTTAGAGGTCTTCGATGCTAGTAATAATCAGTTAGAGGGTAATATACCTTCCTTCTCGTTTGTGGTATCTCTACGGATTCTTCGACTGGCATGCAACCAGTTGACTGGTTTATTGCCAGAAGCTCTATTGAAGGAAAGTTCAATGATATTGTCTGAACTGGATCTTAGTCAAAACAAGCTTGAAGGTCCCATTGGAATTATTACCTCGGTGACTCTGAGGAAGCTTAATTTATCTTCAAACAAATTCTCTGGCCCCTTACCTCTCAGGGTAGGCCACTGTGCCATCATAGATTTGAGTAATAACACACTATCAGGTAATTTCTCAAGGATCCGGTATTGGGGTAACTATGTGGAAGTTGTTCAGCTAAGTACCAACTCATTGAGAGGAATGCTTCCAAACGAAACTTCTCAATTTTTAAGGTTAACTGCACTTAAGGTATCCAATAATTCATTGGAGGGCTTTCTCCCACCAATTTTGGGAACATATCCGGAACTAAAAGAGATTGATCTTAGCCTCAACCAGCTTTCCGGGTTCCTCCTACCAGGCTTCTTCACCTCAACCAAATTGATTAATCTTAATCTCTCCAACAATAAATTTTCTGGATCAATTCCTATTCAATTTCAACCTCCAAATAATCCATTAGTTTCTGCTGAAAATTATAGTCTGGTGTTTCTTGATCTTTCACACAACAACTTGAGTGGGACTCTTCCTTCAAATATGAGTAAGCTTCACAATTTGGCATATCTCAATCTATGCAACAACAAATTGGAAGGTACTATTCCTGATGACCTTCCAGATGAGTTGAGAGTATTGAATGTGTCATTTAATAATCTTTCTGGTGTTGTACCAGAAAACTTAAAGCAGTTTCCTGAATCAGCATTTCATCCAGGAAATACTATGCTGATATTTCCACATTCGCAATCATCACCAAAAGATGCTCCCAACTTAGGTTTTAGAGAACACCGGTTACATAAAAAATCTGCAACAAGGATTGCCCTGATTGCATGTTTGGTTGCTGGTGCTTTTGTGATGGCTTTTGTgggtataataatttattataaggttcatcatcaaaaagaaagGACTTCTAAACAGAATGAAGCAAGAGGCATCACCCAAGAGAGTACTTTCACATCAAATATAGAGGCACCTTACAGAAATTTGGAAGCATTACCACATTCTCAAATGGGGTCTGCTGATGATGCAAGAAACATTCAACCAATGGTAAGGAAGCCAATGGATCTTGGTCATCATGAATTAGTTAAGAATGAGGAAGGAATGTCTTCTCCAATGTCTATTTTGTCACCTTCAAATCCTTCATCTTCTAAAAGCCATAAGTTTGAGAATCCTGCTTCCCTCCAAGTATCTTCTCCAGATAAATTGGTTGGTGACTTGCATATATTTGACGGATCCTTGGTGCTAACTGCAGAAGAACTTTCATGTGCTCTAGCTGAAGTTATTGGCAGGAGCTGTCATGGAACACTCTACAAAGCTACACTTGACTCTGGTCATGCATTGGCTGTCAAATGGTTAAGAGAAGGAATAACTAAAGGGAAAAAAGAGTTGGCAAGGGAAATAAAGAAACTTGGGACTATCAAGCATCCAAACCTGGTTTCTATTCAGGGTTACTACTTGGGGCCACAGGAACATGAGAAACTGATTATATCAAATTACATGAATGCTCAATGTTTGGACGTTTATCTCTATGAGGCAGATAAAAGAAATCTCCATCCTTTGTCTCTTGATGAGAGACTCAGGGTGGCTGTAGAGGTGGCGCAATGTCTGCATTTCCTACATGAAGAGAAAGCCATACCTCATGGCAATCTCAAATCCACAAACATTTTGCTAGAAGCTCCCAACAGAAATGTCCTCCTTACTGACTACAGCCTGCACAGGATACTCACTGCTGCTGGCACTGCTGAGCAAGTTCTGAATGCCGGTGCACTCGGTTATCGGCCTCCCGAGTTTGCTAGATCAAGCAAACCATGCCCTTCCTTGACAAGTGATGTCTATGCATTTGGAGTTGTCTTGTTAGAGCTCCTAACAGGAAGAAATTCTGGAGAAATAGTTTCTGGGATTCCAGGGGTGGTTGACCTCACTGACTGGGTGAGGTTCTTGGCTGAAAAAGACCGTTCTAGCCAGTGCTTTGATAGGTCTCTAGTGGACAAGCATAATGGGGAAAGACCATCTAGAATTCTTGATGACATGCTAAAGGTGGCTCTTAGATGCATCCTTCCAGCATCTGACAGGCCTGACATGAAAACTGTCTTTGATGATCTCTCAACAATAAGGTAG 3057 0.3988 MFVSLMLGLGATGKGMQAIWLMLLLLVDIGLGNSDIDALLEFKKSIQKDASGLVVNSWDFKSLDTNGCPQNWYGILCSEGNVISITLDNAGLVGEFNFLAISGLTMLRNLSAVNNQFTGDLLHMGAMESLEYLDLSLNKFNGPLLSNFVQLHKLVYLNLSSNEFGGTLPIEFHKLEQLKYLDLHTNNFSGDIMHIISQMGSVLYVDMSSNRFSGTLDLGIGDESFLSSIQYLNISHNSLSGELFAHDGMPYLDNLEVFDASNNQLEGNIPSFSFVVSLRILRLACNQLTGLLPEALLKESSMILSELDLSQNKLEGPIGIITSVTLRKLNLSSNKFSGPLPLRVGHCAIIDLSNNTLSGNFSRIRYWGNYVEVVQLSTNSLRGMLPNETSQFLRLTALKVSNNSLEGFLPPILGTYPELKEIDLSLNQLSGFLLPGFFTSTKLINLNLSNNKFSGSIPIQFQPPNNPLVSAENYSLVFLDLSHNNLSGTLPSNMSKLHNLAYLNLCNNKLEGTIPDDLPDELRVLNVSFNNLSGVVPENLKQFPESAFHPGNTMLIFPHSQSSPKDAPNLGFREHRLHKKSATRIALIACLVAGAFVMAFVGIIIYYKVHHQKERTSKQNEARGITQESTFTSNIEAPYRNLEALPHSQMGSADDARNIQPMVRKPMDLGHHELVKNEEGMSSPMSILSPSNPSSSKSHKFENPASLQVSSPDKLVGDLHIFDGSLVLTAEELSCALAEVIGRSCHGTLYKATLDSGHALAVKWLREGITKGKKELAREIKKLGTIKHPNLVSIQGYYLGPQEHEKLIISNYMNAQCLDVYLYEADKRNLHPLSLDERLRVAVEVAQCLHFLHEEKAIPHGNLKSTNILLEAPNRNVLLTDYSLHRILTAAGTAEQVLNAGALGYRPPEFARSSKPCPSLTSDVYAFGVVLLELLTGRNSGEIVSGIPGVVDLTDWVRFLAEKDRSSQCFDRSLVDKHNGERPSRILDDMLKVALRCILPASDRPDMKTVFDDLSTIR 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3247 1018 Gene3D Transferase(Phosphotransferase) domain 1 814 1018 - -
Ssu6g3247 1018 ProSiteProfiles Protein kinase domain profile. 735 1017 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu6g3247 1018 Pfam Protein tyrosine and serine/threonine kinase 737 1012 IPR001245 GO:0004672|GO:0006468
Ssu6g3247 1018 PANTHER OS07G0626500 PROTEIN 16 1017 - -
Ssu6g3247 1018 MobiDBLite consensus disorder prediction 680 704 - -
Ssu6g3247 1018 SUPERFAMILY L domain-like 124 537 - -
Ssu6g3247 1018 MobiDBLite consensus disorder prediction 682 704 - -
Ssu6g3247 1018 Gene3D Ribonuclease Inhibitor 223 564 IPR032675 -
Ssu6g3247 1018 Gene3D Ribonuclease Inhibitor 32 201 IPR032675 -
Ssu6g3247 1018 Gene3D Phosphorylase Kinase; domain 1 741 813 - -
Ssu6g3247 1018 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 16 1017 - -
Ssu6g3247 1018 Pfam Leucine rich repeat N-terminal domain 33 78 IPR013210 -
Ssu6g3247 1018 SUPERFAMILY Protein kinase-like (PK-like) 737 1014 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3247 Ssu-Chr6 74036658 74040823 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g3247 229 544 Receptor kinase-like Gene Family AT1G55610 30.564 3.09e-25 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Ssu6g3247 PK_Tyr_Ser-Thr 7.5e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3247 - - gmx:100781394 1786.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g3247 6 74036658 74040823 Ssu6g3247 6 74036658 74040823 ECH