Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3215 ATGTCCGATGACATGCTCATTCATTTCTCGTCCAACTCTTCCAACCAATCAGATCAGTCTCTGCCTACAAAGATTGCAAAGTTGGAAGCTCGTATGGTTGGTAAGGGTTCCTCCACCACTGCTCAGCAATCAGGTTGGTCCTCTGTGTCTGTTCCTTCAGCTGGGAAATTTGGTGGAGCTGCTGAAGATTTGGCTGAACCATCCATTTCCAGTGATTCTGATGATGATAATGGTGGGGAATTCTTAATACAAGCCAATACACAGAAGCGCCAAAAACTTCAAGAAGATGGTAGCTCCGCTAATGTTTTTGAACGTGTTGAGGTTGTTACTGATGGAAGGCAAACTAGTTTGGAGGCTGTGGAGACAAAAATGAATGTTGATGTGAATAGAAAGAAACATGGCCGCGGAAGAGGGAGTTCTGGTTCAGGTAGAGGCCGTGGTTCCAGAGTTAATGATCAGACCAGAACACAAATTTCTCCTCCAACTGTTTTGGCTTCAAATGGTCAGATTGAGAATGTACACCACAAGGATGGCAGACTCAGTGATCAGTTTCATAATGATAATTGTGCTTCATTAGAGGAGGAGGTTGCATCCTTACAAGCAAAAGTTATTGCTTTGGAGGAGGAATTGCGTAAATCAAAGCAAGAGACCTCTGAATATCAGAATCTTTGTCGACAGTTAGAAAAGGAACTGAAGGAGCTGACTGATCAGGAACAGCAAATGAAGCCTAAGagaatgaaaataatatctgACTTGCTGATATCCGTTTCAAAGGCTGAGAGACAAGAAGCAAGGCTTAAAGTACGACAAGACTCACTGAGACTTGGAAATGTTGGTGTAATCAGAGCTGGAACTGTCATATCTGAGACCTGGGAAGATGGTCAAGCATTAAAGGATCTGAATGCCCAGCTTaaacaactaatagaaacaAAGGAGGCAATTGAACGGCAGCgcaaattatttaagaaaaaacagTCTGATAAGGGTGATGGAACAGATACAGAGGCTGGATTACCAGAAGATATTCTAATTCATGATGAAATCTACAAATCTCGATTAGCTAGCCTCAAACGAGAAGAGGAAATTATTTTGCGGGAGAGGGATCGGTATGAACTAGAGAAGGGGAGGTTAATTCGTGAAATGAAACGTATACGGGATGAAGATGGTTCACGGTTTAACAACTTTCAGATTCTAAATCATCGTTATGCCCTTCTTAACCTTCTTGGGAAGGGAGGATTCAGTGAGGTGTACAAGGCTTTTGACTTGGTGGAGCATAGATATGTTGCATGCAAGCTTCATGGTTTAAATGCTCAATGGAGTGAAGAGAAGAAGCAAAGTTACATACGGCATGCAATTCGGGAGTATAATATTCACAAGACTCTTGTACATCGTCACATTGTTCGTTTATGGGACATCTTTGAGATTGATCAAAACACATTCTGCACTGTTCTAGAGTATTGTAGTGGTATATACagttaa 1479 0.405 MSDDMLIHFSSNSSNQSDQSLPTKIAKLEARMVGKGSSTTAQQSGWSSVSVPSAGKFGGAAEDLAEPSISSDSDDDNGGEFLIQANTQKRQKLQEDGSSANVFERVEVVTDGRQTSLEAVETKMNVDVNRKKHGRGRGSSGSGRGRGSRVNDQTRTQISPPTVLASNGQIENVHHKDGRLSDQFHNDNCASLEEEVASLQAKVIALEEELRKSKQETSEYQNLCRQLEKELKELTDQEQQMKPKRMKIISDLLISVSKAERQEARLKVRQDSLRLGNVGVIRAGTVISETWEDGQALKDLNAQLKQLIETKEAIERQRKLFKKKQSDKGDGTDTEAGLPEDILIHDEIYKSRLASLKREEEIILRERDRYELEKGRLIREMKRIRDEDGSRFNNFQILNHRYALLNLLGKGGFSEVYKAFDLVEHRYVACKLHGLNAQWSEEKKQSYIRHAIREYNIHKTLVHRHIVRLWDIFEIDQNTFCTVLEYCSGIYS 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3215 492 Coils Coil 353 387 - -
Ssu6g3215 492 ProSitePatterns Protein kinases ATP-binding region signature. 408 431 IPR017441 GO:0005524
Ssu6g3215 492 Coils Coil 182 244 - -
Ssu6g3215 492 MobiDBLite consensus disorder prediction 1 80 - -
Ssu6g3215 492 MobiDBLite consensus disorder prediction 35 51 - -
Ssu6g3215 492 Coils Coil 297 324 - -
Ssu6g3215 492 MobiDBLite consensus disorder prediction 1 23 - -
Ssu6g3215 492 MobiDBLite consensus disorder prediction 144 161 - -
Ssu6g3215 492 PANTHER MIXED LINEAGE PROTEIN KINASE 1 489 - -
Ssu6g3215 492 PANTHER BNAC09G36930D PROTEIN 1 489 - -
Ssu6g3215 492 SUPERFAMILY Protein kinase-like (PK-like) 392 489 IPR011009 -
Ssu6g3215 492 MobiDBLite consensus disorder prediction 124 161 - -
Ssu6g3215 492 Pfam Protein kinase domain 403 489 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu6g3215 492 ProSiteProfiles Protein kinase domain profile. 402 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu6g3215 492 Gene3D Phosphorylase Kinase; domain 1 398 489 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TLK Ssu6g3215 Pkinase 3.8e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3215 K08864 - gmx:100805168 864.759