Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3200 ATGTTCCTCTTATTTGGTCTCCGTGACCCAATGAAACTCAAAAAAGGGTTACTGTTCTTTTTGTTGCTGGAGTATGTTTGTCGCAGTGTGGAATCCAAGTGTGTGAAGGGATGTGATGTAGCTTTAGCTTCCTACTATGTCAGTCCAGGGTATTTTCCCTTAGAAAATATAACGCGCTTGATGGAATCAAGCGTTCTATCCAATTCAGACGTTGTAACTAGctataataaagacaaaatattcaatgataTGGTGCAATCCTTTGTCAGACTCAATATTCCATTCTCCTGTGGCTGTATTGGTGGTGAGTTTCTGGGGCATGTGTTTGAGTATTCAGCTGCTGCAGGTGACACCTATGATTCGATTGCCAAAGTGACATATGCCAATCTCACCACTGTTGAGCTTTTGCGGAGGTTCAACAGTTATGACCAAAATGATATACCCGCAAATGCCAAGCTTAATGTCACGGTCAATTGTTCTTGTGGGAACAGCCAGGTTTCAAAAGATTATGGGCTGTTTATTACCTATCCGCTCAGGCCTGGGAATAATTTGCATGACATTGCCAACGAGACTCAGCTTGATGCACAGTTGCTTCAGAGTTACAATCCTGGTGTCAATTTCAGCCAAGAGAGTGGGATTGTTTTCATTCCAGGAAGAGGTATCCTCTCCTTTTCCCATCATGTTCATTTGGTTCACTCATCACTGTATTTTGATCAAAATGGAGACTATGTTCCCTTGTACCCTAGGAAAACAGGTCTAGCTAGGGGTGCCGCTGTTGGAATATCTATAGCAGGAATATGCGGGCTTCTGTTATTAGTAATTTTCGTATATGTTAGATACTTCCAGaataaggaaggaaagaaagataaattgcCAACAGAAAATTCAATGGTGTTTTCAACCCAAGATGGTACTGAATATGAAACTTCAGGATCCAGTGGGCTTGCTACCGCTAGTGCTGCTGGCCTTACAGGCATTATGGTGGCAAAATCAATGGAGTTCTCATATCAAGAACTAGCCAAGGCTACAAATAACTTCAGCTTGGAGAATAAAATTGGTCAAGGTGGATTTGGAGCTGTCTATTATGCAGAACTTGGAGGCGAGAAAACAGCTATTAAGAAGATGGACGTACAAGCATCGACAGAATTTCTTTGTGAGTTGAAGGTCTTAACACACGTTCATCACTTGAATCTGGTGCGCTTGATTGGATATTGCGTGGAGGGATCTCTTTTCCTTGTATATGAATATATTGACAATGGAAACTTGGGCCAATATTTGCATGGTACAGGGAAGGATCCTTTGCCATGGTCTAGCCGAGTGCAAATTGCGCTAGATTCAGCAAGAGGCCTTGAATATATTCACGAGCACACAGTGCCTGTGTATATCCATCGCGATGTAAAATCTGCAAACATATTAATAGACAAAAACTTACGTGGAAAGGTTGCGGATTTTGGCTTGACCAAACTTATTGAAGTTGGAGGCTCCACACTCCACACTCGTCTTGTGGGAACATTTGGATACATGCCACCAGAATATGCTCAATATGGTGACATTTCTCCAAAAGTAGATGTATATGCTTTTGGAGTTGTTCTGTATGAACTTATTTCTGCAAAGAATGCTGTTCTGAAGACAGGCGAATCTGTTGCTGAAACAAAGGGCCTTGTAGCTTTGTTTGAAGAAGCACTTAGTCAGAGTAATCCTTCAGAAGGTATTCGCAAACTGGTGGATCCTAGGCTCGGAGAAAACTACCCAGTTGATTCAGTTCTCAAGATTGCCCAACTTGGGAGAGCTTGTACAAGAGATAATCCACTACTACGCCCAAGTATGAGGTCTATAGTTGTTGCTCTTATGACACTTTCATCACCTACAGAGGATTGTGATGATGACGCTTCCTACGAAAATCAAACTCTCATAAATCTACTGTCTGTGAGATGA 1935 0.4098 MFLLFGLRDPMKLKKGLLFFLLLEYVCRSVESKCVKGCDVALASYYVSPGYFPLENITRLMESSVLSNSDVVTSYNKDKIFNDMVQSFVRLNIPFSCGCIGGEFLGHVFEYSAAAGDTYDSIAKVTYANLTTVELLRRFNSYDQNDIPANAKLNVTVNCSCGNSQVSKDYGLFITYPLRPGNNLHDIANETQLDAQLLQSYNPGVNFSQESGIVFIPGRGILSFSHHVHLVHSSLYFDQNGDYVPLYPRKTGLARGAAVGISIAGICGLLLLVIFVYVRYFQNKEGKKDKLPTENSMVFSTQDGTEYETSGSSGLATASAAGLTGIMVAKSMEFSYQELAKATNNFSLENKIGQGGFGAVYYAELGGEKTAIKKMDVQASTEFLCELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIDNGNLGQYLHGTGKDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDVKSANILIDKNLRGKVADFGLTKLIEVGGSTLHTRLVGTFGYMPPEYAQYGDISPKVDVYAFGVVLYELISAKNAVLKTGESVAETKGLVALFEEALSQSNPSEGIRKLVDPRLGENYPVDSVLKIAQLGRACTRDNPLLRPSMRSIVVALMTLSSPTEDCDDDASYENQTLINLLSVR 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3200 644 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-LIKE 12 644 - -
Ssu6g3200 644 Gene3D Phosphorylase Kinase; domain 1 326 416 - -
Ssu6g3200 644 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Ssu6g3200 644 ProSiteProfiles Protein kinase domain profile. 346 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu6g3200 644 Gene3D Transferase(Phosphotransferase) domain 1 417 639 - -
Ssu6g3200 644 SMART serkin_6 346 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu6g3200 644 Pfam Protein tyrosine and serine/threonine kinase 347 614 IPR001245 GO:0004672|GO:0006468
Ssu6g3200 644 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 12 644 IPR044812 GO:0019199|GO:0045087
Ssu6g3200 644 SUPERFAMILY Protein kinase-like (PK-like) 328 616 IPR011009 -
Ssu6g3200 644 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3200 Ssu-Chr6 73018072 73022540 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g3200 11 644 Receptor kinase-like Gene Family AT3G21630 54.829 0.0 648
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Ssu6g3200 PK_Tyr_Ser-Thr 1.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3200 - K13429 gmx:100792559 1052.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g3200 6 73018072 73022540 Ssu6g3200 6 73018072 73022540 ECH