Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3199 ATGGATTCAGCCAGAGGTCTTCAATACATTCATGAGCATACGGTGCCTGTATATATCCATCGTGACATAAAgtcagaaaatattttaatagacaaaaactTCTGTGCAAAGgTTGCAGACTTTGGATTAACCAAGTTGATTGATGTTGGAAGTTCATCACTTCCCACTGTTAATATGAAAGGCACATTTGGTTACATGCCACCAGAATATGCATATGGCAATGTTTCTCCCAAAATAGATGTCTATGCTTTTGGAGTAGTTCTTTATGAACTAATTTCTGCTAAAGAAGCAGTGATGAAGGGTGGTGCATCTGGTCCTGAATTAAAGGGCCTTGTATCTTTGTTTGATGAAGTTTTTGATGAGCAAGATCCCACAGAAGGTCTTAAAAAACTGGTGGATCCTAGGCTTGGAGATAACTACCCAATTGATGCAGTTTGGAAGATGGCACAACTTGCCAGAGCATGCACAGAGAACGATCCACAACAACGTCCAAATATGAGTTCTGTTGTGGTTACTCTCACAGCATTTATTTCAACTACTGAGGATTGGGATATTGCTTCCATCATTGAAAATCCAACTCTTGCAAATTTAATGTCTGGGAAATAG 606 0.3779 MDSARGLQYIHEHTVPVYIHRDIKSENILIDKNFCAKVADFGLTKLIDVGSSSLPTVNMKGTFGYMPPEYAYGNVSPKIDVYAFGVVLYELISAKEAVMKGGASGPELKGLVSLFDEVFDEQDPTEGLKKLVDPRLGDNYPIDAVWKMAQLARACTENDPQQRPNMSSVVVTLTAFISTTEDWDIASIIENPTLANLMSGK 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3199 201 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 1 201 IPR044812 GO:0019199|GO:0045087
Ssu6g3199 201 SMART serkin_6 1 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu6g3199 201 ProSitePatterns Serine/Threonine protein kinases active-site signature. 18 30 IPR008271 GO:0004672|GO:0006468
Ssu6g3199 201 PANTHER LYSM RECEPTOR KINASE 1B 1 201 - -
Ssu6g3199 201 Gene3D Transferase(Phosphotransferase) domain 1 1 190 - -
Ssu6g3199 201 SUPERFAMILY Protein kinase-like (PK-like) 3 170 IPR011009 -
Ssu6g3199 201 Pfam Protein kinase domain 4 170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu6g3199 201 ProSiteProfiles Protein kinase domain profile. 1 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3199 Ssu-Chr6 73013436 73014979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g3199 1 201 Receptor kinase-like Gene Family AT3G21630 60.199 1.25e-81 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Ssu6g3199 Pkinase 8.3e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3199 - K13429 gmx:100803042 373.244