Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3179 ATGTCTAGGGAAGCAGATGGTACGAGGATCGAGGAAAGTATGGACACGGGAAAGGAGACAGCGGAGAAGAACCTGAAGCTGAAAGACCAAAATGTATCATGGGCAAAGCTACGCCGCGTAGATTCTTTCAATTTGGAAGCTGGAAGAGTTTCTATGGTTGCACACAATCGCTACAAGATGGGTTGGAGAATGACGCTGAGCTTAGCATTTCAAAGCCTAGGGGTTGTATATGGTGATATTGGTACATCTCCACTTTATGTGTATGCCAGCACCTTCCCCAATCAAATTAAGAACAATGATGACATTCTTGGTGTCTTGTCTCTCATCATCTATACCATTGCACTCATACCCATGCTTAAATATGTCTTCATCGTATTGTGGGCCGACCACAATGGCAACGGTGGAGCGTTTGCACTCTATTCGTTAATATGTAGGCATATGAAGATGAGTTTGATTCCAAATCAACAACCAGAAGACAGGGAGCTTTCTAACTACAAACTCGAAACACCGTCTAGCCAGGTGAAACGAGTCCATAAACTAAAACAGAAGCTTGAGAACAGTCATTTTGCGCGGATTGTGCTTTTACTTCTAGCTATAATGGGAACTTCCATGGTTATAGGAGATGGGATTCTTACCCCATCAATTTCAGACGCTGTTGTGGGGATCACTATAGCAATCTTGGTAGTCCTATTTTCTGTACAACGATTCGGTACTGATAAGGTGGGATTCTCATTCGCtccaattatttttgtgtggtTTTCATTCATCGGTGGAATTGGCCTTTACAACTTATTCAAATATGACATTGGAGTATTACGTGCTTTtaatccaaaatatatatatgattacttCAAACGGAACGGCAAGCAAGGGTGGATATCACTTGGTGGAGTCTTTTTATGCATAACAGgATCCGAGGCCATGTTTGCTGACTTGGGTCACTTTAATGTACGAGCCATTCaaATTAGCTTTTCTTGCATTACATGTCCTGCAATATTGGCTGCTTACATTGGGCAAGCAGCATTTCTACGGAAGTTCCCTGGGAAAGTAGCTAATACTTTCTATGATAGTATACCGCATCGTTTATATTGGCCTACATTTGTTGTCGCTGTTGCTGCTGCCATTATAGCCAGTCAAGCAATGATTTCAGGAGCATTTTCCATTATATCCCAGGCCCTAAGTCTAGGTTGTTTCCCAAGAGTTAAGGTAGTGCATACTTCCATTAAACATCAGGGTCAGGTGTATATTCCTGAGATCAACTACATGTTCATGATCGCGTGTATTATGGTCTGTGCTGCCTTCAAGACCACAGAAAAGATTAGCCATGCATATGGGATTGCAGTTATTGGTGACATGATGATCACAACAACTCTGGTTACGCTTATAATGCTAGTTATATGGAAAAAGAGTCTATGGCGCGTGGCTCTCTTCTCTTTGACTTTCGGTTTTGTTGagtttctttatttctcttctcaacTAACCAAGTTCATAGGAGGAGGGTATCTTCCAATTGTATCAGCTCTGTTCTTGACGACAGTGATGGGAATCTGGCATTACGTGCACAAAGAAAGATACATGTTTGAACTAAAGAACAAGGTTTCTAGTGCGTATTTGAATGAAGTGGCCAACAACACAGACATAACGCGAGTGCCCGGAATTGGACTTCTGTATTCTGAGTTAGTACAAGGCATTCCTCCTATATTCCCACACTTAATAAGCAGCATACCATCTATCCATTCGGTTGTTGTGTTTGTCTCGATTAAGGCAATTCCTGTTAGTAGAGTTGCATCAGAGGAGAGGTTTTTGTTTCGGCAGGTGGAGCCAAGAGAGTATAGAATTTTTCGTTGTGTTGTGAGGCATGGTTACAATGACTTGCTTGAGGATCCTGCGGAGTTTGAGTCACAGTTAATACAAAATCTGAAGGCATTCATTCAAGAAGAGAACTATATGCTCGAGGTTGAGGAAACTGCAACTGAACAGGCACCAGCAGTGCCTGTGGCTTCTACCAATGAGAGTGAGATGGCAGGTAAAGAAGGAAAGGGTAGGTCCACTACCAGTTCTTCCCCCGGAATAGTCCCAAATCAAGCTGCGTCTCGAGCCTCATCCGACTCCATTCAATCATTGGGTGCGAGTGCGACCAAATCATCCACTTTCCTTGCCACCCCCATCCAGGGAGCTGAAGAGGAAATCAAATTCATAGACAAAGCGTTGGAGAAGGGCGTGGTGTATATGCTAGCGGAAGCAGAGGTAGTAGCTCACCCAAATTCCTCCATCTTGAATAAGATTGTTGTCAACTATGCTTATAGCTTCTTGAGAAAGAACTTTAGGCAAGGACAGAATTTGCTGGCAATCCCATGCAACAGACTTCTCAAGGTTGGAATGACATATGAAATATGA 2397 0.4189 MSREADGTRIEESMDTGKETAEKNLKLKDQNVSWAKLRRVDSFNLEAGRVSMVAHNRYKMGWRMTLSLAFQSLGVVYGDIGTSPLYVYASTFPNQIKNNDDILGVLSLIIYTIALIPMLKYVFIVLWADHNGNGGAFALYSLICRHMKMSLIPNQQPEDRELSNYKLETPSSQVKRVHKLKQKLENSHFARIVLLLLAIMGTSMVIGDGILTPSISDAVVGITIAILVVLFSVQRFGTDKVGFSFAPIIFVWFSFIGGIGLYNLFKYDIGVLRAFNPKYIYDYFKRNGKQGWISLGGVFLCITGSEAMFADLGHFNVRAIQISFSCITCPAILAAYIGQAAFLRKFPGKVANTFYDSIPHRLYWPTFVVAVAAAIIASQAMISGAFSIISQALSLGCFPRVKVVHTSIKHQGQVYIPEINYMFMIACIMVCAAFKTTEKISHAYGIAVIGDMMITTTLVTLIMLVIWKKSLWRVALFSLTFGFVEFLYFSSQLTKFIGGGYLPIVSALFLTTVMGIWHYVHKERYMFELKNKVSSAYLNEVANNTDITRVPGIGLLYSELVQGIPPIFPHLISSIPSIHSVVVFVSIKAIPVSRVASEERFLFRQVEPREYRIFRCVVRHGYNDLLEDPAEFESQLIQNLKAFIQEENYMLEVEETATEQAPAVPVASTNESEMAGKEGKGRSTTSSSPGIVPNQAASRASSDSIQSLGASATKSSTFLATPIQGAEEEIKFIDKALEKGVVYMLAEAEVVAHPNSSILNKIVVNYAYSFLRKNFRQGQNLLAIPCNRLLKVGMTYEI 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3179 798 TIGRFAM kup: potassium uptake protein 68 798 IPR003855 GO:0015079|GO:0016020|GO:0071805
Ssu6g3179 798 MobiDBLite consensus disorder prediction 679 699 - -
Ssu6g3179 798 PANTHER POTASSIUM TRANSPORTER 5 26 797 - -
Ssu6g3179 798 MobiDBLite consensus disorder prediction 660 699 - -
Ssu6g3179 798 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 26 797 IPR003855 GO:0015079|GO:0016020|GO:0071805
Ssu6g3179 798 Pfam K+ potassium transporter 69 624 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3179 Ssu-Chr6 72698278 72704886 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g3179 11 798 Inorganic Solute Cotransporters AT4G13420 57.302 0.0 936
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3179 K03549 - gmx:100814313 1276.15