Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3173 ATGATGGTATCCCCCATCTTCAAACTTTTGCTATCATCAATCGTTCTTTGCGCTGTGTTGCAGCCATACACCCATGCTCTTAGAAAGACCTACATTGTATACTTGGGAGAACACTCTCATGGTCCAAGCCCTTCTCTTGGTGATCTTGAGTCAGCCACAAATTCCCATTATGATTTACTGGCCTCAGTCCTGGGAAGCCATGAGAAAGCAAAGGAAGCAGTCATGTACTCATACAATAAGCACATAAATGGCTTCGCTGCACTACTTGAAGAGGAAGAGGCGTCAGACATTGCAAAAAACCCAAACGTAATTTCTGTTTTCTTGAGCAAAGAGTATAAATTACACACTACCAGGTCATGGGACTTTCTTGGGCTGGAAAAATATGGAGGAATTCCTGCAGAGTCCGCTTGGTGGAAAGGAAAATTTGGTGAAGATACAATCATTGCTAATTTTGATTCAGGCGTCTGGCCCGAACACATCAGTTTCAACGACAACGGATACGGCCCCGTGCCATCAAAGTGGCGTGGGAACGGGGTCTGTCAGATTGACCATTTTAGACGTTCAAAGAAAACATTCTGTAACAGGAAGTTGATTGGAGCAAGAGTCTTTAGCGAAGGTTACGAGTCACAATATGGCAAACTTGATCCGTTAAAACGCACTGCACGTGACTTTGTTGGCCACGGTACCCATACCCTGTCAACTGCTGCTGGTAATTTCGCTCCTGGTGCAACTGTCTTCGGCAATGGCAATGGCACCGCAAAGGGTGGGTCCCCAAGAGCTCGCGCCGCTGCCTACAAAGTGTGTTGGTCTACGAATGATGCCGGTAGCTGCCACGAAGCAGACATTCTACAAGCGTTTGATTATGCCATATATGATGGTGTTGATGTCATCTCTGCCTCTGTGGGTGGCTCTAATCCTTACATTGAAGCCTTCTTCACAGATGGGGTTTCCATAGGGGCCTTCCATGCAGTGGCTAGAAATATAGTCGTAGTTTGCTCTGCTGGCAATGACGGGCCAGCACCTAGAACTGTAACAAATGTCGCACCCTGGTCCTTCACAGTTGCTGCTAGTACAATTGACAGGGATTTTCTCACCAACATTTCTCTTGGTAACAAACATTATCTAAAGGGAGCTAGTCTTAATAGAGGCTTACCATCACAGAAATTTTATCCATTGGCTCATGCTGTCAATTCTAGACTTCCTAATGCCACAATTCAAGACGCCCGTCTTTGCAAGCCTGGAACACTTGATCCTACCAAAATAAGGGGAAACATATTGATCTGCATTCGACTTGATGGAACGACATCAGTAGCTCAGGGTTACGAAGCTGCTCATGCTGGCGCAGTGGGAATGTTTGTGGTCAATGAGGAGAAAAGTGGCAATACACTTCTAGCTGAGCCTCATCCTATACCGGCTGCAAGTTTGGATGTCAGTGAGGATGACGATATTGATGAGCGTGAATGGTTTATTAAAGGAGGTTCGGACAAAAACAATAGCAGGAAACTTGCTGCTTACATGACTAAAGCAAGAACATATTTAGGAATAAAGCCTGCCCCAATTATGGCTGGATTCTCATCCAGGGGTCCCAATGCAGTACAACCATTGATACTCAAgCCTGACATAACTGCCCCTGGTGTCAACATATTGGCGGCTTATTCATTAGCCTCAAGTCCATCAAATCTACCATCAGATAGACGCCGTGTTCCTTTCAATATGCAACAAGGAACTTCTATGTCATGCCCTCATGTTGCTGGTGTTGTAGGTCTTCTCAAAACACTTCATCCTGATTGGAGTCCAGCAGCTATAAAATCAGCCATTATGACTACTGCTACCACACTAGATAACAACAACCTACCGATTCGAGACGCATTTGATCAGATAGCAACTCCGTTCGATTATGGCGCGGGACATATTCAGCCTAACCTTGCAATGGACCCTGGACTTGTTTATGATATGAGAGCAAGGGATTACTTGAACTTCATATGTGCTCATGATCACAAccaatattttctcaaatacttTAATCGCGGCTCTTACAGTTGTCCAAAGTCTTACAACATTGAAAATCTCAACTATCCTTCGATCACAGTAGCAAATCGAGGGATGAACCCTATACGTGTTACTCGTACAGTTACCAACGTGGGGACTCCAACAAGCACGTATGTTGTGAGAGCTAACGTACTTGAAGGATTTAAGGTTTTTGTTCGACCAAGTTCGTTGACTTTTACGACTATTGGAGAAAAGAAGAGCTTTCGGGTTATTCTCCTGGCAACGAGTGTGCCTAGTCATGGTTTTCCAGTATTTGGGAACTTATCTTGGACAGATGGCAATCACACGGTAACCAGTCCTATTGTTGTCCTGTAA 2364 0.4446 MMVSPIFKLLLSSIVLCAVLQPYTHALRKTYIVYLGEHSHGPSPSLGDLESATNSHYDLLASVLGSHEKAKEAVMYSYNKHINGFAALLEEEEASDIAKNPNVISVFLSKEYKLHTTRSWDFLGLEKYGGIPAESAWWKGKFGEDTIIANFDSGVWPEHISFNDNGYGPVPSKWRGNGVCQIDHFRRSKKTFCNRKLIGARVFSEGYESQYGKLDPLKRTARDFVGHGTHTLSTAAGNFAPGATVFGNGNGTAKGGSPRARAAAYKVCWSTNDAGSCHEADILQAFDYAIYDGVDVISASVGGSNPYIEAFFTDGVSIGAFHAVARNIVVVCSAGNDGPAPRTVTNVAPWSFTVAASTIDRDFLTNISLGNKHYLKGASLNRGLPSQKFYPLAHAVNSRLPNATIQDARLCKPGTLDPTKIRGNILICIRLDGTTSVAQGYEAAHAGAVGMFVVNEEKSGNTLLAEPHPIPAASLDVSEDDDIDEREWFIKGGSDKNNSRKLAAYMTKARTYLGIKPAPIMAGFSSRGPNAVQPLILKPDITAPGVNILAAYSLASSPSNLPSDRRRVPFNMQQGTSMSCPHVAGVVGLLKTLHPDWSPAAIKSAIMTTATTLDNNNLPIRDAFDQIATPFDYGAGHIQPNLAMDPGLVYDMRARDYLNFICAHDHNQYFLKYFNRGSYSCPKSYNIENLNYPSITVANRGMNPIRVTRTVTNVGTPTSTYVVRANVLEGFKVFVRPSSLTFTTIGEKKSFRVILLATSVPSHGFPVFGNLSWTDGNHTVTSPIVVL 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3173 787 Pfam Peptidase inhibitor I9 30 115 IPR010259 -
Ssu6g3173 787 Gene3D - 661 787 - -
Ssu6g3173 787 ProSiteProfiles Serine proteases, subtilase domain profile. 119 644 - -
Ssu6g3173 787 Pfam Subtilase family 143 616 IPR000209 GO:0006508|GO:0008236
Ssu6g3173 787 Pfam Fibronectin type-III domain 689 786 IPR041469 -
Ssu6g3173 787 CDD PA_subtilisin_like 366 483 - -
Ssu6g3173 787 Gene3D - 360 513 - -
Ssu6g3173 787 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 115 IPR037045 -
Ssu6g3173 787 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 19 787 - -
Ssu6g3173 787 CDD Peptidases_S8_3 112 611 IPR034197 -
Ssu6g3173 787 Gene3D Peptidase S8/S53 domain 145 657 IPR036852 GO:0004252|GO:0006508
Ssu6g3173 787 PRINTS Subtilisin serine protease family (S8) signature 143 162 IPR015500 -
Ssu6g3173 787 PRINTS Subtilisin serine protease family (S8) signature 223 236 IPR015500 -
Ssu6g3173 787 PRINTS Subtilisin serine protease family (S8) signature 574 590 IPR015500 -
Ssu6g3173 787 ProSitePatterns Serine proteases, subtilase family, serine active site. 575 585 IPR023828 -
Ssu6g3173 787 SUPERFAMILY Subtilisin-like 114 648 IPR036852 GO:0004252|GO:0006508
Ssu6g3173 787 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 19 787 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3173 Ssu-Chr6 72236612 72243550 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g3173 30 786 Subtilisin-like Serine Gene Family AT2G04160 52.694 0.0 778
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3173 - - gmx:100794135 1451.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g3173 6 72236612 72243550 Ssu6g3173 6 72236612 72243550 ECH