Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3171 ATGGCATTCTCCATCTTCAGACTTGTTCTGTTATCATTCCTTCTCTGTACTTTCTTGCAGGAACCCACCAATGCCCTCAGAAAGACCTACGTTGTGTACTTGGGAGGACATTCTCATGGTCCAGACCCTTCTCCTAGTGATCTTGAAGCAGCCACAAATTCCCATTATGATTTACTGGCTTCTGTCTTAGGAAGTCATGAGAAGGCCAAGGAAGCAATTATGTACTCCTACAATAAGCACATCAATGGCTTTGCGGCCCTACTTGAAGAGGAAGAAGCATCAGAGATTGCAAAAAACCCAAATGTAATTTCTGTTTTCTTGAGCAAAGAGCATAAATTGCACACTACCAGGTCATGGGATTTTCTTGGACtggaaaaaaatggaagaattcCTGCAAACTCCGCTTGGACGAAAGCAAGATTtggagaaaatataataattgctAATATTGATACAGGCGTTTGGCCCGAACACCCTAGTTTCCGCGACAATGGATACGGTCCTGTTCCTTCGAAATGGCGTGGGAAAGGTGTTTGTCAGATTGACAATTTTAATGGTACAAAGAAATATTTCTGTAACAGGAAGCTGATTGGAGCAAGAGTGTTCAGCAAAAATCACGAGGCCGAAGTTGGGAAGCTTGACCCAACACTCCACACCGCACGTGACATCGTAGGCCATGGTACCCACACACTGTCAACTGCTGGTGGTAATTTTGTTCGTGGTGCAGATGTGGAAGGTAACGGCAAAGGTACTGCTAAGGGAGGGTCCCCAAGAGCTCGCGTTGTAGCCTACAAAGCGTGCTGGAATAAAATGAATACAGGAGGGTGCCAGGAAGCAGACTTACTAGCAGCATTTGAATCTGCCATAGATGATGGCGTTGATGTCATCTCTGCCTCTGTGGGTTGGGCTAATCCCTATAAGGAAGCTTTGTTAACTGATGGGATTTCCATAGGGGCATTCCATGCAGTCGCCCGAGATATAGTTGTGGTTTGCTCTGCTGGGAATGATGGGCCATCACCTTTAAGTGTCTCAAATGTGGCACCCTGGTCCTTCACCGTTGCTGCTAGTACAATGGACAGGGACTTTCTCAGCAACATTTCTGTTGGCAACAAACAATACATGAAGGGTGCCAGTCTTAATCGAGGCATGCCACGATCGGAGCGAAAGTTCTATCCCGTGATTAATTCTGTCGACGCTAAACTTCCTAATGTGTCTACTGATGATGCTCGTCTTTGCAAACCAGGAACACTTGATCCTGCCAAAGTAAGGGGAAAAATACTAGTCTGCCTTCGAGGTGATAAATTACAATCAGTTAGTGAGGGCGAACAGGGTAAACTTGCTGGCGCTGTGGCAGTTTTAGTGCAAAATGATAAGCAAAGTGGAAATTTACTTCTGGCCGAGAATCAAGTTTTACCTGCTGCAAGTATCAGTGGAACGAATACCTCTTATGCCGAAAATAATGGCAACGGCGGTAGCAAGGAGATTCTAGCTTACTTGACTGCTGCAAGAACATATATAGGAGTAAAACCAGCTCCAATCATAGCTGGGTTCTCATCCAGAGGTCCCAATTCTGTGCAACCATTGATACTAAAgcCTGACATAACTGCTCCTGGTGTGAACGTAATTGCTGCTTTTACACAAGGCGCGGGTCCGTCTAATCTTGCGTCAGATACACGTCGGGCTCTTTTCAATGTGCAACAGGGAACTTCTATGTCCTGTCCTCATGTTGCTGGCATCGCGGGTCTTCTCAAAACATATCATCCTGATTGGAGTCCGGCAGCTATCAAATCTGCTATTATGACTACAGCTACAACACTAGATAACACGAATCAACCAATTAAGAACGCATTTGATAAGGTATCAACTCCATTCGAATACGGCGCCGGACACATTCAGCCTAACCTTGCAATTCACCCTGGACTCATTTATGATTTAAGCACAACCGATTACTTGAATTTCTTGTGTGCTTCTGGTTACAACCAAGATTTACTCAGGTTGTTTGCCAATTTGACATCCCTTTACACTTGTCCCAAGTCTTACAGAATTGAAGATTTCAACTATCCTTCAATCACGGTGCATTATCCTGGGTCAAGGCCCATAAATGTTACTCGTACTGTTACAAACGTTGGGCCTCCAAGCACATATGTTGTGAATACTCATGGGCCGAACGGGATTAAGGTTCTTGTTCAACCAAGTTCATTGACTTTTAAGAAAACCGGAGAGAAGAAGAGTTATCAGGTTATTCTGCAAGCAACTGCGGTGCCCAGTGGGTTTCCTGTATTTGGTAATTTGACTTGGACAGATGGCAAGCACAGAGTAACCAGTCCTATTACAGTGCTGTAA 2343 0.4405 MAFSIFRLVLLSFLLCTFLQEPTNALRKTYVVYLGGHSHGPDPSPSDLEAATNSHYDLLASVLGSHEKAKEAIMYSYNKHINGFAALLEEEEASEIAKNPNVISVFLSKEHKLHTTRSWDFLGLEKNGRIPANSAWTKARFGENIIIANIDTGVWPEHPSFRDNGYGPVPSKWRGKGVCQIDNFNGTKKYFCNRKLIGARVFSKNHEAEVGKLDPTLHTARDIVGHGTHTLSTAGGNFVRGADVEGNGKGTAKGGSPRARVVAYKACWNKMNTGGCQEADLLAAFESAIDDGVDVISASVGWANPYKEALLTDGISIGAFHAVARDIVVVCSAGNDGPSPLSVSNVAPWSFTVAASTMDRDFLSNISVGNKQYMKGASLNRGMPRSERKFYPVINSVDAKLPNVSTDDARLCKPGTLDPAKVRGKILVCLRGDKLQSVSEGEQGKLAGAVAVLVQNDKQSGNLLLAENQVLPAASISGTNTSYAENNGNGGSKEILAYLTAARTYIGVKPAPIIAGFSSRGPNSVQPLILKPDITAPGVNVIAAFTQGAGPSNLASDTRRALFNVQQGTSMSCPHVAGIAGLLKTYHPDWSPAAIKSAIMTTATTLDNTNQPIKNAFDKVSTPFEYGAGHIQPNLAIHPGLIYDLSTTDYLNFLCASGYNQDLLRLFANLTSLYTCPKSYRIEDFNYPSITVHYPGSRPINVTRTVTNVGPPSTYVVNTHGPNGIKVLVQPSSLTFKKTGEKKSYQVILQATAVPSGFPVFGNLTWTDGKHRVTSPITVL 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3171 780 Gene3D - 654 780 - -
Ssu6g3171 780 ProSiteProfiles Serine proteases, subtilase domain profile. 118 637 - -
Ssu6g3171 780 CDD Peptidases_S8_3 111 604 IPR034197 -
Ssu6g3171 780 ProSitePatterns Serine proteases, subtilase family, serine active site. 568 578 IPR023828 -
Ssu6g3171 780 PRINTS Subtilisin serine protease family (S8) signature 567 583 IPR015500 -
Ssu6g3171 780 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
Ssu6g3171 780 PRINTS Subtilisin serine protease family (S8) signature 222 235 IPR015500 -
Ssu6g3171 780 SUPERFAMILY Subtilisin-like 113 641 IPR036852 GO:0004252|GO:0006508
Ssu6g3171 780 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 18 780 IPR045051 -
Ssu6g3171 780 CDD PA_subtilisin_like 365 477 - -
Ssu6g3171 780 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 18 780 - -
Ssu6g3171 780 Pfam Fibronectin type-III domain 684 779 IPR041469 -
Ssu6g3171 780 Pfam Subtilase family 142 610 IPR000209 GO:0006508|GO:0008236
Ssu6g3171 780 Pfam Peptidase inhibitor I9 29 114 IPR010259 -
Ssu6g3171 780 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 114 IPR037045 -
Ssu6g3171 780 Gene3D Peptidase S8/S53 domain 144 650 IPR036852 GO:0004252|GO:0006508
Ssu6g3171 780 Gene3D - 359 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3171 Ssu-Chr6 72033570 72164229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g3171 29 779 Subtilisin-like Serine Gene Family AT2G04160 53.448 0.0 789
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3171 - - gmx:100796255 1305.04