Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3129 ATGAGGAAAAGGGAGAGGGAGAACCCTTGTGGCGTGTGTGGCCACTATCACAAATACGAAGAAGGTGAAGTGTGTTCGATTTGCGGGCACCGGATTCCGGTTGGATCGGAGAAAACTTCGATACAAGTTAGTGCTTTTCCTTCCGTGGTTCTGCCGGAATTTCTCTACCTGGGAAGCTACGACAACGCATCACGCTCGGAGCTTCTCAAGACTCAGGGGATTTCTCGTATCCTCAATACTGTCCCTTCTTGTCAAAATCTCTACAAGAACTCATTTACCTATCACTGCCTCCCAGATGACAAAACTTTGCCATTTGATGAAGCAATTCAGTTTTTAGAGCAATGTGAGAAGGATAAGGAGCGTGTTCTCGTTCATTGCATGTCAGGAAAGAGTAGGTCTCCAGCTATTGTGATTGCGTACTTGATGAAGTCCAAAGGATGGAGACTTGCACAGAGTTATCAGTGGGTAAAGGAACGGAGACCTTCTGTTGAATTAACTCAAGGTGTGTACCAGCAACTGCAGGAGTTTGAGCAAAAGATTTATGGACTGATCGATAGTGGCAGCTCTCTGCTGCCCGGTTTCTTGCCAACAGCGCCTCCTTCAATTAGCTTTGGTTTCCCAAAGATCAATGATCCAGCTCAGCTTCCTTCCTTCAGCACTGCTGGAAATCCTTCAATCTTCACACGAGCACCCCTAGATATTGCTCCTACCGAGTTTACATTCGGCGCAGATCAGATGCAGAAAAATGTGGCCGGAAGTCCCTTTAATGCAACTCCACCGAATCCAAATGGTACTGATATCCAAATGGATGGTTCTTGA 819 0.464 MRKRERENPCGVCGHYHKYEEGEVCSICGHRIPVGSEKTSIQVSAFPSVVLPEFLYLGSYDNASRSELLKTQGISRILNTVPSCQNLYKNSFTYHCLPDDKTLPFDEAIQFLEQCEKDKERVLVHCMSGKSRSPAIVIAYLMKSKGWRLAQSYQWVKERRPSVELTQGVYQQLQEFEQKIYGLIDSGSSLLPGFLPTAPPSISFGFPKINDPAQLPSFSTAGNPSIFTRAPLDIAPTEFTFGADQMQKNVAGSPFNATPPNPNGTDIQMDGS 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3129 272 SMART dsp_5 46 179 IPR020422 GO:0006470|GO:0008138
Ssu6g3129 272 SMART ptp_7 83 185 IPR003595 -
Ssu6g3129 272 CDD DSP_plant_IBR5-like 47 176 - -
Ssu6g3129 272 Gene3D Protein tyrosine phosphatase superfamily 40 183 IPR029021 -
Ssu6g3129 272 MobiDBLite consensus disorder prediction 251 272 - -
Ssu6g3129 272 Pfam Dual specificity phosphatase, catalytic domain 55 178 IPR000340 GO:0008138|GO:0016311
Ssu6g3129 272 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 103 171 IPR000387 GO:0016311|GO:0016791
Ssu6g3129 272 ProSitePatterns Tyrosine specific protein phosphatases active site. 124 134 IPR016130 GO:0016311|GO:0016791
Ssu6g3129 272 PANTHER PROTEIN-TYROSINE-PHOSPHATASE IBR5 1 272 - -
Ssu6g3129 272 ProSiteProfiles Dual specificity protein phosphatase domain profile. 46 182 IPR020422 GO:0006470|GO:0008138
Ssu6g3129 272 PANTHER PROTEIN-TYROSINE-PHOSPHATASE IBR5 1 272 IPR044212 GO:0009734|GO:0009738|GO:0033549|GO:0043407
Ssu6g3129 272 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 47 181 IPR029021 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g3129 1 166 Protein tyrosine phosphatase (PTP) family AT2G04550 75.740 1.43e-98 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3129 K04459 - gmx:100806021 530.791