Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3099 ATGCTTCCATTGGTTATGTTACGGCGTGTTGATTCACTGAGGTATAGTTCTGCAATATCAATCCTACTAGCATTGGTCTTTGTTGCAATATGCTCATCAATGGCGTTTACTGCATTGTGGTCCGGCAAAACTCGGTCACTAAGGATAGTGCCTGATTTCTCTCAAGTCACCGTCCTTGATCTTTTCACCACTGTCCCAGTGTTTGTCACGGGTTTCGGATTCCATCTCAATGTTCATCCAATCAGAGCAGGGCTTGGAAAAGCTGCACACATGGGTTTGGCTACGCGGATTTCGTTAATTATCTGCGTGGCTATTTATTTTGCTATTGGCTTCTCTGGGTACCTTTTGTTTGGGGATTCCATCATGCCTGACGTGCTAGTTAACTTTGACCAAAACTCCAACACCAGTTCTGGCCAATTGCTCAATGACATTGTTCGGTTAACCTATGCACTCCATCTTGCGCTTGTGTTCCCCATCATGAACTATTGCTTGAGAGCCAACGTAGATGAACTAATtttctcaaacaaaaataagtctCCTCTAGCATTAGACACCCCAAGATTTGTGTCACTCACTTTGACTTTGCTAGCCCTCACATACTTGGTGGCCGTGGCCATCCCAAacatttggtatttttttcagtttttgggATCCACAACCATTGTTTGTCTCTCATTCATCTTCCCTGCCTCAATTGTTCTAAGGGACATGCATGGCATATCAAAGACAAAAGATCAAGTCATGGCAATAGTGGTGATTGTTTTGGCTGTAGGGACAAGCGGAATAGCTATATGGACCAACTTGAATGGTTCAGGGGCTGATCAGTGA 828 0.4215 MLPLVMLRRVDSLRYSSAISILLALVFVAICSSMAFTALWSGKTRSLRIVPDFSQVTVLDLFTTVPVFVTGFGFHLNVHPIRAGLGKAAHMGLATRISLIICVAIYFAIGFSGYLLFGDSIMPDVLVNFDQNSNTSSGQLLNDIVRLTYALHLALVFPIMNYCLRANVDELIFSNKNKSPLALDTPRFVSLTLTLLALTYLVAVAIPNIWYFFQFLGSTTIVCLSFIFPASIVLRDMHGISKTKDQVMAIVVIVLAVGTSGIAIWTNLNGSGADQ 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3099 275 PANTHER AMINO ACID TRANSPORTER 1 273 - -
Ssu6g3099 275 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 1 273 - -
Ssu6g3099 275 Pfam Transmembrane amino acid transporter protein 2 248 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3099 Ssu-Chr6 70507566 70532972 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g3099 1 274 Amino Acid or Auxin Permease AAAP Family AT3G56200 54.182 1.80e-91 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3099 - - gmx:100794031 470.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g3099 6 70507566 70532972 Ssu6g3099 6 70507566 70532972 ECH
Ssu9g1654 9 53382411 53386196 Ssu6g3099 6 70507566 70532972 PCT