Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3098 ATGAAGCTAGAATCCGTGTCCAACATCACCCAAGTTGTTGCCCCGCTCCTCCCACCGGACTGCGAGCGCTCCCCGGAAGATCCGAGTCCGCAAAATGGATCAGTTACCGGAGCGGTGTTCAACATATCAAGCACCATGATCGGTGCCGGAATCATGTCAATTCCGGCGACCACGAAGGTGCTAGGCATAGTTCCGGGGTTCGTGGTGATCGTGTTGGTGGCACTGATCACAGATGTCACTGTGGAGTTTATGCTAAGGTACACAAGTTCGGGTAAATCCAGTACCTACGCGGGCATGATGGGCGAATCGTTTGGCTCCCTGGGATCCCTTGCCGTCAAGATTTGCGTCATCATAACCAATTTGGGTATCCTTATCATCTACTTCATTATTCTGGGTAAGTTCACCTTCCTTAATTAA 417 0.5084 MKLESVSNITQVVAPLLPPDCERSPEDPSPQNGSVTGAVFNISSTMIGAGIMSIPATTKVLGIVPGFVVIVLVALITDVTVEFMLRYTSSGKSSTYAGMMGESFGSLGSLAVKICVIITNLGILIIYFIILGKFTFLN 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3098 138 PANTHER AMINO ACID TRANSPORTER 11 133 - -
Ssu6g3098 138 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 11 133 - -
Ssu6g3098 138 Pfam Transmembrane amino acid transporter protein 32 133 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3098 Ssu-Chr6 70505862 70506278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g3098 4 133 Amino Acid or Auxin Permease AAAP Family AT5G38820 41.538 6.92e-34 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3098 - - gmx:100794031 177.948